SOTAVerified

Cell Segmentation

Cell Segmentation is a task of splitting a microscopic image domain into segments, which represent individual instances of cells. It is a fundamental step in many biomedical studies, and it is regarded as a cornerstone of image-based cellular research. Cellular morphology is an indicator of a physiological state of the cell, and a well-segmented image can capture biologically relevant morphological information.

Source: Cell Segmentation by Combining Marker-controlled Watershed and Deep Learning

Papers

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Showing 126–150 of 178 papers

TitleStatusHype
The Multi-modality Cell Segmentation Challenge: Towards Universal Solutions—0
Three-Dimensional GPU-Accelerated Active Contours for Automated Localization of Cells in Large Images—0
Unsupervised Domain Adaptation for the Histopathological Cell Segmentation through Self-Ensembling—0
Unsupervised Segmentation of Overlapping Cervical Cell Cytoplasm—0
Weakly Supervised Multi-Task Learning for Cell Detection and Segmentation—0
Prompting Vision-Language Model for Nuclei Instance Segmentation and ClassificationCode0
Pushing the limits of cell segmentation models for imaging mass cytometryCode0
An Automatic Nuclei Image Segmentation Based on Multi-Scale Split-Attention U-NetCode0
Attention-Guided Residual U-Net with SE Connection and ASPP for Watershed-Based Cell Segmentation in Microscopy ImagesCode0
Recovering the Imperfect: Cell Segmentation in the Presence of Dynamically Localized ProteinsCode0
Cell Segmentation and Tracking using CNN-Based Distance Predictions and a Graph-Based Matching StrategyCode0
Analysis of the performance of U-Net neural networks for the segmentation of living cellsCode0
Cellpose+, a morphological analysis tool for feature extraction of stained cell imagesCode0
Superadditivity and Convex Optimization for Globally Optimal Cell Segmentation using Deformable Shape ModelsCode0
Applying Faster R-CNN for Object Detection on Malaria ImagesCode0
Unsupervised cell segmentation by fast Gaussian ProcessesCode0
Guided Prompting in SAM for Weakly Supervised Cell Segmentation in Histopathological ImagesCode0
Eosinophils Instance Object Segmentation on Whole Slide Imaging Using Multi-label Circle RepresentationCode0
CASC-AI: Consensus-aware Self-corrective AI Agents for Noise Cell SegmentationCode0
IRNet: Instance Relation Network for Overlapping Cervical Cell SegmentationCode0
Knowing What to Label for Few Shot Microscopy Image Cell SegmentationCode0
EmbedTrack -- Simultaneous Cell Segmentation and Tracking Through Learning Offsets and Clustering BandwidthsCode0
Scribble-supervised Cell Segmentation Using Multiscale Contrastive RegularizationCode0
Cascaded Diffusion Models for 2D and 3D Microscopy Image Synthesis to Enhance Cell SegmentationCode0
Learning with minimal effort: leveraging in silico labeling for cell and nucleus segmentationCode0
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All datasetsFluo-N2DL-HeLaLIVECellDIC-C2DH-HeLaEVICANFluo-N2DH-GOWT1Fluo-N2DH-SIM+CoNSePFluo-C3DL-MDA231MoNuSegPanNukePhC-C2DH-U373

Benchmark Results

#ModelMetricClaimedVerifiedStatus
1Dual U-Net (Neighbor distances)SEG (~Mean IoU)0.9—Unverified
2DecLSTMSEG (~Mean IoU)0.84—Unverified
3EncLSTMSEG (~Mean IoU)0.81—Unverified
#ModelMetricClaimedVerifiedStatus
1Cascade Mask RCNN-ResNest-200mask AP47.9—Unverified
2CenterMask-VoVNet2-FPNmask AP47.8—Unverified
3Point2Maskmask AP43.53—Unverified
#ModelMetricClaimedVerifiedStatus
1EncLSTMSEG (~Mean IoU)0.79—Unverified
2DecLSTMSEG (~Mean IoU)0.51—Unverified
#ModelMetricClaimedVerifiedStatus
1DeepCeNSmask AP52.56—Unverified
2EVICAN-MRCNNmask AP32.2—Unverified
#ModelMetricClaimedVerifiedStatus
1DecLSTMSEG (~Mean IoU)0.85—Unverified
2EncLSTMSEG (~Mean IoU)0.85—Unverified
#ModelMetricClaimedVerifiedStatus
1EncLSTMSEG (~Mean IoU)0.81—Unverified
2DecLSTMSEG (~Mean IoU)0.8—Unverified
#ModelMetricClaimedVerifiedStatus
1PromptNuAverage Dice0.86—Unverified
#ModelMetricClaimedVerifiedStatus
1Dual U-Net (Neighbor distances)SEG (~Mean IoU)0.62—Unverified
#ModelMetricClaimedVerifiedStatus
1PromptNuAverage Dice0.84—Unverified
#ModelMetricClaimedVerifiedStatus
1PromptNuAverage Dice0.86—Unverified
#ModelMetricClaimedVerifiedStatus
1EncLSTMSEG (~Mean IoU)0.84—Unverified