Cell Segmentation

Cell Segmentation is a task of splitting a microscopic image domain into segments, which represent individual instances of cells. It is a fundamental step in many biomedical studies, and it is regarded as a cornerstone of image-based cellular research. Cellular morphology is an indicator of a physiological state of the cell, and a well-segmented image can capture biologically relevant morphological information.

Source: Cell Segmentation by Combining Marker-controlled Watershed and Deep Learning

Papers

Recently Added Most Hyped Most Active Needs Verification Most Verified

Showing 1–10 of 178 papers

Title	Date	Tasks	Status	Hype
PixCell: A generative foundation model for digital histopathology images	Jun 5, 2025	Cell SegmentationData Augmentation	—Unverified	0
Moment kernels: a simple and scalable approach for equivariance to rotations and reflections in deep convolutional networks	May 27, 2025	Cell SegmentationImage Registration	—Unverified	0
Unsupervised cell segmentation by fast Gaussian Processes	May 24, 2025	Cell SegmentationGaussian Processes	CodeCode Available	0
Reinforced Correlation Between Vision and Language for Precise Medical AI Assistant	May 6, 2025	Cell SegmentationMedical Image Analysis	—Unverified	0
Hybrid Dense-UNet201 Optimization for Pap Smear Image Segmentation Using Spider Monkey Optimization	Apr 17, 2025	Cell SegmentationImage Segmentation	—Unverified	0
CellVTA: Enhancing Vision Foundation Models for Accurate Cell Segmentation and Classification	Apr 1, 2025	Cell SegmentationInstance Segmentation	CodeCode Available	1
Prompting Vision-Language Model for Nuclei Instance Segmentation and Classification	Mar 27, 2025	Cell SegmentationContrastive Learning	CodeCode Available	0
Self-Attention Diffusion Models for Zero-Shot Biomedical Image Segmentation: Unlocking New Frontiers in Medical Imaging	Mar 23, 2025	Cell SegmentationDiagnostic	—Unverified	0
COIN: Confidence Score-Guided Distillation for Annotation-Free Cell Segmentation	Mar 14, 2025	Cell SegmentationInstance Segmentation	CodeCode Available	0
HistoSmith: Single-Stage Histology Image-Label Generation via Conditional Latent Diffusion for Enhanced Cell Segmentation and Classification	Feb 12, 2025	Cell SegmentationImage Generation	CodeCode Available	1

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All datasets Fluo-N2DL-HeLa LIVECell DIC-C2DH-HeLa EVICAN Fluo-N2DH-GOWT1 Fluo-N2DH-SIM+CoNSeP Fluo-C3DL-MDA231 MoNuSeg PanNuke PhC-C2DH-U373

Benchmark Results

#	Model	Metric	Claimed	Verified	Status
1	Dual U-Net (Neighbor distances)	SEG (~Mean IoU)	0.9	—	Unverified
2	DecLSTM	SEG (~Mean IoU)	0.84	—	Unverified
3	EncLSTM	SEG (~Mean IoU)	0.81	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	Cascade Mask RCNN-ResNest-200	mask AP	47.9	—	Unverified
2	CenterMask-VoVNet2-FPN	mask AP	47.8	—	Unverified
3	Point2Mask	mask AP	43.53	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	EncLSTM	SEG (~Mean IoU)	0.79	—	Unverified
2	DecLSTM	SEG (~Mean IoU)	0.51	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	DeepCeNS	mask AP	52.56	—	Unverified
2	EVICAN-MRCNN	mask AP	32.2	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	DecLSTM	SEG (~Mean IoU)	0.85	—	Unverified
2	EncLSTM	SEG (~Mean IoU)	0.85	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	EncLSTM	SEG (~Mean IoU)	0.81	—	Unverified
2	DecLSTM	SEG (~Mean IoU)	0.8	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	PromptNu	Average Dice	0.86	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	Dual U-Net (Neighbor distances)	SEG (~Mean IoU)	0.62	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	PromptNu	Average Dice	0.84	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	PromptNu	Average Dice	0.86	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	EncLSTM	SEG (~Mean IoU)	0.84	—	Unverified