SOTAVerified

Cell Segmentation

Cell Segmentation is a task of splitting a microscopic image domain into segments, which represent individual instances of cells. It is a fundamental step in many biomedical studies, and it is regarded as a cornerstone of image-based cellular research. Cellular morphology is an indicator of a physiological state of the cell, and a well-segmented image can capture biologically relevant morphological information.

Source: Cell Segmentation by Combining Marker-controlled Watershed and Deep Learning

Papers

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Showing 101–125 of 178 papers

TitleStatusHype
Improved cell segmentation using deep learning in label-free optical microscopy images—0
LIVECell—A large-scale dataset for label-free live cell segmentationCode1
An Automatic Nuclei Image Segmentation Based on Multi-Scale Split-Attention U-NetCode0
Unsupervised Domain Adaptation for the Histopathological Cell Segmentation through Self-Ensembling—0
DeepCeNS: An end-to-end Pipeline for Cell and Nucleus Segmentation in Microscopic Images—0
A Multi-Branch Hybrid Transformer Networkfor Corneal Endothelial Cell Segmentation—0
PolarMask++: Enhanced Polar Representation for Single-Shot Instance Segmentation and BeyondCode1
Robust 3D Cell Segmentation: Extending the View of CellposeCode1
Contour Proposal Networks for Biomedical Instance SegmentationCode1
An Efficient Blood-Cell Segmentation for the Detection of Hematological Disorders—0
DeepCervix: A Deep Learning-based Framework for the Classification of Cervical Cells Using Hybrid Deep Feature Fusion Techniques—0
CellTrack R-CNN: A Novel End-To-End Deep Neural Network for Cell Segmentation and Tracking in Microscopy ImagesCode0
aura-net : robust segmentation of phase-contrast microscopy images with few annotationsCode0
Accurate Cell Segmentation in Digital Pathology Images via Attention Enforced Networks—0
Red Blood Cell Segmentation with Overlapping Cell Separation and Classification on Imbalanced DatasetCode1
Recovering the Imperfect: Cell Segmentation in the Presence of Dynamically Localized ProteinsCode0
Attention-Based Transformers for Instance Segmentation of Cells in MicrostructuresCode1
Multiclass Yeast Segmentation in Microstructured Environments with Deep LearningCode0
Spherical Harmonics for Shape-Constrained 3D Cell Segmentation—0
CellCycleGAN: Spatiotemporal Microscopy Image Synthesis of Cell Populations using Statistical Shape Models and Conditional GANs—0
Local Label Point Correction for Edge Detection of Overlapping Cervical CellsCode1
Quantifying the effect of image compression on supervised learning applications in optical microscopy—0
Accurate and versatile 3D segmentation of plant tissues at cellular resolutionCode1
Faster Mean-shift: GPU-accelerated clustering for cosine embedding-based cell segmentation and trackingCode1
Few-Shot Microscopy Image Cell SegmentationCode1
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All datasetsFluo-N2DL-HeLaLIVECellDIC-C2DH-HeLaEVICANFluo-N2DH-GOWT1Fluo-N2DH-SIM+CoNSePFluo-C3DL-MDA231MoNuSegPanNukePhC-C2DH-U373

Benchmark Results

#ModelMetricClaimedVerifiedStatus
1Dual U-Net (Neighbor distances)SEG (~Mean IoU)0.9—Unverified
2DecLSTMSEG (~Mean IoU)0.84—Unverified
3EncLSTMSEG (~Mean IoU)0.81—Unverified
#ModelMetricClaimedVerifiedStatus
1Cascade Mask RCNN-ResNest-200mask AP47.9—Unverified
2CenterMask-VoVNet2-FPNmask AP47.8—Unverified
3Point2Maskmask AP43.53—Unverified
#ModelMetricClaimedVerifiedStatus
1EncLSTMSEG (~Mean IoU)0.79—Unverified
2DecLSTMSEG (~Mean IoU)0.51—Unverified
#ModelMetricClaimedVerifiedStatus
1DeepCeNSmask AP52.56—Unverified
2EVICAN-MRCNNmask AP32.2—Unverified
#ModelMetricClaimedVerifiedStatus
1DecLSTMSEG (~Mean IoU)0.85—Unverified
2EncLSTMSEG (~Mean IoU)0.85—Unverified
#ModelMetricClaimedVerifiedStatus
1EncLSTMSEG (~Mean IoU)0.81—Unverified
2DecLSTMSEG (~Mean IoU)0.8—Unverified
#ModelMetricClaimedVerifiedStatus
1PromptNuAverage Dice0.86—Unverified
#ModelMetricClaimedVerifiedStatus
1Dual U-Net (Neighbor distances)SEG (~Mean IoU)0.62—Unverified
#ModelMetricClaimedVerifiedStatus
1PromptNuAverage Dice0.84—Unverified
#ModelMetricClaimedVerifiedStatus
1PromptNuAverage Dice0.86—Unverified
#ModelMetricClaimedVerifiedStatus
1EncLSTMSEG (~Mean IoU)0.84—Unverified