Cell Segmentation

Cell Segmentation is a task of splitting a microscopic image domain into segments, which represent individual instances of cells. It is a fundamental step in many biomedical studies, and it is regarded as a cornerstone of image-based cellular research. Cellular morphology is an indicator of a physiological state of the cell, and a well-segmented image can capture biologically relevant morphological information.

Source: Cell Segmentation by Combining Marker-controlled Watershed and Deep Learning

Papers

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Showing 151–160 of 178 papers

Title	Date	Tasks	Status
Nuclei Detection Using Mixture Density Networks	Aug 22, 2018	Cell SegmentationImage-Variation	—Unverified
Open Source Infrastructure for Automatic Cell Segmentation	Sep 12, 2024	Cell SegmentationDrug Discovery	—Unverified
Panoptic Segmentation with an End-to-End Cell R-CNN for Pathology Image Analysis	Sep 28, 2018	Cell SegmentationNuclear Segmentation	—Unverified
Point2Mask: A Weakly Supervised Approach for Cell Segmentation Using Point Annotation	Jul 25, 2022	Cell SegmentationInstance Segmentation	—Unverified
Prior-guided Diffusion Model for Cell Segmentation in Quantitative Phase Imaging	May 10, 2024	Cell SegmentationSegmentation	—Unverified
Progressive Vision-Language Prompt for Multi-Organ Multi-Class Cell Semantic Segmentation with Single Branch	Dec 4, 2024	Cell SegmentationSegmentation	—Unverified
Quantifying the effect of image compression on supervised learning applications in optical microscopy	Sep 26, 2020	Cell SegmentationData Compression	—Unverified
Reconstructing the Forest of Lineage Trees of Diverse Bacterial Communities Using Bio-inspired Image Analysis	Jun 22, 2017	Cell SegmentationCell Tracking	—Unverified
Reinforced Correlation Between Vision and Language for Precise Medical AI Assistant	May 6, 2025	Cell SegmentationMedical Image Analysis	—Unverified
Robust Method for Semantic Segmentation of Whole-Slide Blood Cell Microscopic Image	Jan 28, 2020	Cell SegmentationDecoder	—Unverified

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All datasets Fluo-N2DL-HeLa LIVECell DIC-C2DH-HeLa EVICAN Fluo-N2DH-GOWT1 Fluo-N2DH-SIM+CoNSeP Fluo-C3DL-MDA231 MoNuSeg PanNuke PhC-C2DH-U373

Benchmark Results

#	Model	Metric	Claimed	Verified	Status
1	Dual U-Net (Neighbor distances)	SEG (~Mean IoU)	0.9	—	Unverified
2	DecLSTM	SEG (~Mean IoU)	0.84	—	Unverified
3	EncLSTM	SEG (~Mean IoU)	0.81	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	Cascade Mask RCNN-ResNest-200	mask AP	47.9	—	Unverified
2	CenterMask-VoVNet2-FPN	mask AP	47.8	—	Unverified
3	Point2Mask	mask AP	43.53	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	EncLSTM	SEG (~Mean IoU)	0.79	—	Unverified
2	DecLSTM	SEG (~Mean IoU)	0.51	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	DeepCeNS	mask AP	52.56	—	Unverified
2	EVICAN-MRCNN	mask AP	32.2	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	DecLSTM	SEG (~Mean IoU)	0.85	—	Unverified
2	EncLSTM	SEG (~Mean IoU)	0.85	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	EncLSTM	SEG (~Mean IoU)	0.81	—	Unverified
2	DecLSTM	SEG (~Mean IoU)	0.8	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	PromptNu	Average Dice	0.86	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	Dual U-Net (Neighbor distances)	SEG (~Mean IoU)	0.62	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	PromptNu	Average Dice	0.84	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	PromptNu	Average Dice	0.86	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	EncLSTM	SEG (~Mean IoU)	0.84	—	Unverified