Cell Segmentation

Cell Segmentation is a task of splitting a microscopic image domain into segments, which represent individual instances of cells. It is a fundamental step in many biomedical studies, and it is regarded as a cornerstone of image-based cellular research. Cellular morphology is an indicator of a physiological state of the cell, and a well-segmented image can capture biologically relevant morphological information.

Source: Cell Segmentation by Combining Marker-controlled Watershed and Deep Learning

Papers

Recently Added Most Hyped Most Active Needs Verification Most Verified

Showing 101–110 of 178 papers

Title	Date	Tasks	Status
Multimodal Alignment of Histopathological Images Using Cell Segmentation and Point Set Matching for Integrative Cancer Analysis	Sep 30, 2024	Cell SegmentationGraph Matching	—Unverified
Neural Stain Normalization and Unsupervised Classification of Cell Nuclei in Histopathological Breast Cancer Images	Nov 9, 2018	Cell SegmentationClustering	—Unverified
Nuclei Detection Using Mixture Density Networks	Aug 22, 2018	Cell SegmentationImage-Variation	—Unverified
Open Source Infrastructure for Automatic Cell Segmentation	Sep 12, 2024	Cell SegmentationDrug Discovery	—Unverified
Panoptic Segmentation with an End-to-End Cell R-CNN for Pathology Image Analysis	Sep 28, 2018	Cell SegmentationNuclear Segmentation	—Unverified
Point2Mask: A Weakly Supervised Approach for Cell Segmentation Using Point Annotation	Jul 25, 2022	Cell SegmentationInstance Segmentation	—Unverified
Prior-guided Diffusion Model for Cell Segmentation in Quantitative Phase Imaging	May 10, 2024	Cell SegmentationSegmentation	—Unverified
Progressive Vision-Language Prompt for Multi-Organ Multi-Class Cell Semantic Segmentation with Single Branch	Dec 4, 2024	Cell SegmentationSegmentation	—Unverified
Quantifying the effect of image compression on supervised learning applications in optical microscopy	Sep 26, 2020	Cell SegmentationData Compression	—Unverified
QANet -- Quality Assurance Network for Image Segmentation	Apr 9, 2019	Cell SegmentationImage Segmentation	—Unverified

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All datasets Fluo-N2DL-HeLa LIVECell DIC-C2DH-HeLa EVICAN Fluo-N2DH-GOWT1 Fluo-N2DH-SIM+CoNSeP Fluo-C3DL-MDA231 MoNuSeg PanNuke PhC-C2DH-U373

Benchmark Results

#	Model	Metric	Claimed	Verified	Status
1	Dual U-Net (Neighbor distances)	SEG (~Mean IoU)	0.9	—	Unverified
2	DecLSTM	SEG (~Mean IoU)	0.84	—	Unverified
3	EncLSTM	SEG (~Mean IoU)	0.81	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	Cascade Mask RCNN-ResNest-200	mask AP	47.9	—	Unverified
2	CenterMask-VoVNet2-FPN	mask AP	47.8	—	Unverified
3	Point2Mask	mask AP	43.53	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	EncLSTM	SEG (~Mean IoU)	0.79	—	Unverified
2	DecLSTM	SEG (~Mean IoU)	0.51	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	DeepCeNS	mask AP	52.56	—	Unverified
2	EVICAN-MRCNN	mask AP	32.2	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	DecLSTM	SEG (~Mean IoU)	0.85	—	Unverified
2	EncLSTM	SEG (~Mean IoU)	0.85	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	EncLSTM	SEG (~Mean IoU)	0.81	—	Unverified
2	DecLSTM	SEG (~Mean IoU)	0.8	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	PromptNu	Average Dice	0.86	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	Dual U-Net (Neighbor distances)	SEG (~Mean IoU)	0.62	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	PromptNu	Average Dice	0.84	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	PromptNu	Average Dice	0.86	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	EncLSTM	SEG (~Mean IoU)	0.84	—	Unverified