SOTAVerified

Protein Secondary Structure Prediction

Protein secondary structure prediction is a vital task in bioinformatics, aiming to determine the arrangement of amino acids in proteins, including α-helices, β-sheets, and coils. By analyzing amino acid sequences, computational algorithms and machine learning techniques predict these structural elements. This knowledge is crucial for understanding protein function and interactions. While progress has been made, challenges remain, especially with non-local interactions and low sequence homology. Advancements in machine learning hold promise for improving prediction accuracy, furthering our understanding of protein biology.

Papers

Showing 21–26 of 26 papers

TitleStatusHype
Protein Secondary Structure Prediction Using Deep Multi-scale Convolutional Neural Networks and Next-Step Conditioning—0
Protein Secondary Structure Prediction with Long Short Term Memory Networks—0
PS8-Net: A Deep Convolutional Neural Network to Predict the Eight-State Protein Secondary Structure—0
Reaching Optimized Parameter Set, Protein Secondary Structure Prediction Using Neural Network—0
Seq-SetNet: Exploring Sequence Sets for Inferring Structures—0
Adaptive Residue-wise Profile Fusion for Low Homologous Protein SecondaryStructure Prediction Using External Knowledge—0
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Benchmark Results

#ModelMetricClaimedVerifiedStatus
1DistilProtBertQ30.79—Unverified
2PS4-MegaQ80.76—Unverified
3PS4-ConvQ80.76—Unverified
4ProtT5-XL-UniRef50Q80.74—Unverified
5Porter5Q80.74—Unverified
6Advanced ACNNQ80.73—Unverified
7ProtT5-XL-BFDQ80.71—Unverified
8ProtBert-BFDQ80.7—Unverified
9ACNNQ80.7—Unverified
10LucaAngioloni-WindowCNNQ80.68—Unverified
#ModelMetricClaimedVerifiedStatus
1ProtT5-XL-UniRef50Q30.81—Unverified
2ProtT5-XL-BFDQ30.77—Unverified
3ProtBert-BFDQ30.76—Unverified
4DistilProtBertQ30.72—Unverified
#ModelMetricClaimedVerifiedStatus
1ProtT5-XL-UniRef50Q30.87—Unverified
2ProtT5-XL-BFDQ30.85—Unverified
3ProtBert-BFDQ30.84—Unverified
4DistilProtBertQ30.81—Unverified
#ModelMetricClaimedVerifiedStatus
1PS4-MegaQ80.78—Unverified
2PS4-ConvQ80.78—Unverified
#ModelMetricClaimedVerifiedStatus
1Porter5Q384.19—Unverified
#ModelMetricClaimedVerifiedStatus
1Porter5Q381.74—Unverified
#ModelMetricClaimedVerifiedStatus
1LucaAngioloni-WindowCNNQ80.72—Unverified
#ModelMetricClaimedVerifiedStatus
1Porter5Accuracy84.62—Unverified