Protein Secondary Structure Prediction
Protein secondary structure prediction is a vital task in bioinformatics, aiming to determine the arrangement of amino acids in proteins, including α-helices, β-sheets, and coils. By analyzing amino acid sequences, computational algorithms and machine learning techniques predict these structural elements. This knowledge is crucial for understanding protein function and interactions. While progress has been made, challenges remain, especially with non-local interactions and low sequence homology. Advancements in machine learning hold promise for improving prediction accuracy, furthering our understanding of protein biology.
Papers
Showing 1–10 of 26 papers
Benchmark Results
| # | Model | Metric | Claimed | Verified | Status |
|---|---|---|---|---|---|
| 1 | DistilProtBert | Q3 | 0.79 | — | Unverified |
| 2 | PS4-Mega | Q8 | 0.76 | — | Unverified |
| 3 | PS4-Conv | Q8 | 0.76 | — | Unverified |
| 4 | ProtT5-XL-UniRef50 | Q8 | 0.74 | — | Unverified |
| 5 | Porter5 | Q8 | 0.74 | — | Unverified |
| 6 | Advanced ACNN | Q8 | 0.73 | — | Unverified |
| 7 | ProtT5-XL-BFD | Q8 | 0.71 | — | Unverified |
| 8 | ProtBert-BFD | Q8 | 0.7 | — | Unverified |
| 9 | ACNN | Q8 | 0.7 | — | Unverified |
| 10 | LucaAngioloni-WindowCNN | Q8 | 0.68 | — | Unverified |
| # | Model | Metric | Claimed | Verified | Status |
|---|---|---|---|---|---|
| 1 | ProtT5-XL-UniRef50 | Q3 | 0.81 | — | Unverified |
| 2 | ProtT5-XL-BFD | Q3 | 0.77 | — | Unverified |
| 3 | ProtBert-BFD | Q3 | 0.76 | — | Unverified |
| 4 | DistilProtBert | Q3 | 0.72 | — | Unverified |
| # | Model | Metric | Claimed | Verified | Status |
|---|---|---|---|---|---|
| 1 | ProtT5-XL-UniRef50 | Q3 | 0.87 | — | Unverified |
| 2 | ProtT5-XL-BFD | Q3 | 0.85 | — | Unverified |
| 3 | ProtBert-BFD | Q3 | 0.84 | — | Unverified |
| 4 | DistilProtBert | Q3 | 0.81 | — | Unverified |
| # | Model | Metric | Claimed | Verified | Status |
|---|---|---|---|---|---|
| 1 | PS4-Mega | Q8 | 0.78 | — | Unverified |
| 2 | PS4-Conv | Q8 | 0.78 | — | Unverified |
| # | Model | Metric | Claimed | Verified | Status |
|---|---|---|---|---|---|
| 1 | Porter5 | Q3 | 84.19 | — | Unverified |
| # | Model | Metric | Claimed | Verified | Status |
|---|---|---|---|---|---|
| 1 | Porter5 | Q3 | 81.74 | — | Unverified |
| # | Model | Metric | Claimed | Verified | Status |
|---|---|---|---|---|---|
| 1 | LucaAngioloni-WindowCNN | Q8 | 0.72 | — | Unverified |
| # | Model | Metric | Claimed | Verified | Status |
|---|---|---|---|---|---|
| 1 | Porter5 | Accuracy | 84.62 | — | Unverified |