SOTAVerified

Protein Secondary Structure Prediction

Protein secondary structure prediction is a vital task in bioinformatics, aiming to determine the arrangement of amino acids in proteins, including α-helices, β-sheets, and coils. By analyzing amino acid sequences, computational algorithms and machine learning techniques predict these structural elements. This knowledge is crucial for understanding protein function and interactions. While progress has been made, challenges remain, especially with non-local interactions and low sequence homology. Advancements in machine learning hold promise for improving prediction accuracy, furthering our understanding of protein biology.

Papers

Showing 1120 of 26 papers

TitleStatusHype
Protein Secondary Structure Prediction Using Deep Multi-scale Convolutional Neural Networks and Next-Step Conditioning0
Protein Secondary Structure Prediction with Long Short Term Memory Networks0
PS8-Net: A Deep Convolutional Neural Network to Predict the Eight-State Protein Secondary Structure0
Reaching Optimized Parameter Set, Protein Secondary Structure Prediction Using Neural Network0
Seq-SetNet: Exploring Sequence Sets for Inferring Structures0
Adaptive Residue-wise Profile Fusion for Low Homologous Protein SecondaryStructure Prediction Using External Knowledge0
MUFold-SS: Protein Secondary Structure Prediction Using Deep Inception-Inside-Inception Networks0
Neural Edit Operations for Biological Sequences0
High Quality Prediction of Protein Q8 Secondary Structure by Diverse Neural Network ArchitecturesCode0
Protein Secondary Structure Prediction Using Cascaded Convolutional and Recurrent Neural NetworksCode0
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Benchmark Results

#ModelMetricClaimedVerifiedStatus
1DistilProtBertQ30.79Unverified
2PS4-MegaQ80.76Unverified
3PS4-ConvQ80.76Unverified
4Porter5Q80.74Unverified
5ProtT5-XL-UniRef50Q80.74Unverified
6Advanced ACNNQ80.73Unverified
7ProtT5-XL-BFDQ80.71Unverified
8ProtBert-BFDQ80.7Unverified
9ACNNQ80.7Unverified
10LucaAngioloni-WindowCNNQ80.68Unverified
#ModelMetricClaimedVerifiedStatus
1ProtT5-XL-UniRef50Q30.81Unverified
2ProtT5-XL-BFDQ30.77Unverified
3ProtBert-BFDQ30.76Unverified
4DistilProtBertQ30.72Unverified
#ModelMetricClaimedVerifiedStatus
1ProtT5-XL-UniRef50Q30.87Unverified
2ProtT5-XL-BFDQ30.85Unverified
3ProtBert-BFDQ30.84Unverified
4DistilProtBertQ30.81Unverified
#ModelMetricClaimedVerifiedStatus
1PS4-MegaQ80.78Unverified
2PS4-ConvQ80.78Unverified
#ModelMetricClaimedVerifiedStatus
1Porter5Q384.19Unverified
#ModelMetricClaimedVerifiedStatus
1Porter5Q381.74Unverified
#ModelMetricClaimedVerifiedStatus
1LucaAngioloni-WindowCNNQ80.72Unverified
#ModelMetricClaimedVerifiedStatus
1Porter5Accuracy84.62Unverified