Medical Image Segmentation

Medical Image Segmentation is a computer vision task that involves dividing an medical image into multiple segments, where each segment represents a different object or structure of interest in the image. The goal of medical image segmentation is to provide a precise and accurate representation of the objects of interest within the image, typically for the purpose of diagnosis, treatment planning, and quantitative analysis.

( Image credit: IVD-Net )

Papers

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Showing 451–500 of 2089 papers

Title	Date	Tasks	Status	Hype	Score
Interactive 3D Medical Image Segmentation with SAM 2	Aug 5, 2024	Image SegmentationMedical Image Segmentation	CodeCode Available	1	5
Boosting Semi-supervised Image Segmentation with Global and Local Mutual Information Regularization	Mar 8, 2021	DecoderImage Segmentation	CodeCode Available	1	5
Hi-End-MAE: Hierarchical encoder-driven masked autoencoders are stronger vision learners for medical image segmentation	Feb 12, 2025	Computational EfficiencyImage Segmentation	CodeCode Available	1	5
ParaTransCNN: Parallelized TransCNN Encoder for Medical Image Segmentation	Jan 27, 2024	DecoderImage Segmentation	CodeCode Available	1	5
Cross-head mutual Mean-Teaching for semi-supervised medical image segmentation	Oct 8, 2023	Data AugmentationImage Segmentation	CodeCode Available	1	5
Cross-level Contrastive Learning and Consistency Constraint for Semi-supervised Medical Image Segmentation	Feb 8, 2022	Contrastive LearningImage Segmentation	CodeCode Available	1	5
Histogram of Oriented Gradients Meet Deep Learning: A Novel Multi-task Deep Network for Medical Image Semantic Segmentation	Apr 2, 2022	Face IdentificationImage Segmentation	CodeCode Available	1	5
PASSION: Towards Effective Incomplete Multi-Modal Medical Image Segmentation with Imbalanced Missing Rates	Jul 20, 2024	Image SegmentationMedical Image Segmentation	CodeCode Available	1	5
CrossMatch: Enhance Semi-Supervised Medical Image Segmentation with Perturbation Strategies and Knowledge Distillation	May 1, 2024	Image SegmentationKnowledge Distillation	CodeCode Available	1	5
CrossMoDA 2021 challenge: Benchmark of Cross-Modality Domain Adaptation techniques for Vestibular Schwannoma and Cochlea Segmentation	Jan 8, 2022	Brain SegmentationDomain Adaptation	CodeCode Available	1	5
Cross-Modal Conditioned Reconstruction for Language-guided Medical Image Segmentation	Apr 3, 2024	Image SegmentationMedical Image Segmentation	CodeCode Available	1	5
Boosting multiple sclerosis lesion segmentation through attention mechanism	Jul 1, 2023	Brain Image SegmentationLesion Segmentation	CodeCode Available	1	5
How to Efficiently Adapt Large Segmentation Model(SAM) to Medical Images	Jun 23, 2023	Image SegmentationMedical Image Segmentation	CodeCode Available	1	5
Cross-Modality Multi-Atlas Segmentation via Deep Registration and Label Fusion	Feb 4, 2022	Computational EfficiencyImage Registration	CodeCode Available	1	5
From Claims to Evidence: A Unified Framework and Critical Analysis of CNN vs. Transformer vs. Mamba in Medical Image Segmentation	Mar 3, 2025	BenchmarkingComputational Efficiency	CodeCode Available	1	5
HistoSeg : Quick attention with multi-loss function for multi-structure segmentation in digital histology images	Sep 1, 2022	Boundary DetectionDecoder	CodeCode Available	1	5
DINOv2 based Self Supervised Learning For Few Shot Medical Image Segmentation	Mar 5, 2024	Image SegmentationMedical Image Analysis	CodeCode Available	1	5
Disentangling Human Error from the Ground Truth in Segmentation of Medical Images	Jul 31, 2020	Medical Image SegmentationSegmentation	CodeCode Available	1	5
Pick the Best Pre-trained Model: Towards Transferability Estimation for Medical Image Segmentation	Jul 22, 2023	Image SegmentationMedical Image Segmentation	CodeCode Available	1	5
CSAM: A 2.5D Cross-Slice Attention Module for Anisotropic Volumetric Medical Image Segmentation	Nov 8, 2023	Image SegmentationMedical Image Segmentation	CodeCode Available	1	5
Learning Directional Feature Maps for Cardiac MRI Segmentation	Jul 22, 2020	Cardiac SegmentationMedical Image Segmentation	CodeCode Available	1	5
Automated segmentation of lesions and organs at risk on [68Ga]Ga-PSMA-11 PET/CT images using self-supervised learning with Swin UNETR	Feb 29, 2024	DecoderMedical Image Segmentation	CodeCode Available	1	5
A context based deep learning approach for unbalanced medical image segmentation	Jan 8, 2020	Deep LearningImage Segmentation	CodeCode Available	1	5
HRMedSeg: Unlocking High-resolution Medical Image segmentation via Memory-efficient Attention Modeling	Apr 8, 2025	DecoderGPU	CodeCode Available	1	5
Learning Multi-axis Representation in Frequency Domain for Medical Image Segmentation	Dec 28, 2023	Image SegmentationMedical Image Segmentation	CodeCode Available	1	5
HyperDense-Net: A hyper-densely connected CNN for multi-modal image segmentation	Apr 9, 2018	Brain Segmentationimage-classification	CodeCode Available	1	5
HybridMIM: A Hybrid Masked Image Modeling Framework for 3D Medical Image Segmentation	Mar 18, 2023	Contrastive LearningImage Segmentation	CodeCode Available	1	5
Polyp-SAM++: Can A Text Guided SAM Perform Better for Polyp Segmentation?	Aug 12, 2023	Image SegmentationMedical Image Segmentation	CodeCode Available	1	5
MagicNet: Semi-Supervised Multi-Organ Segmentation via Magic-Cube Partition and Recovery	Dec 29, 2022	AnatomyData Augmentation	CodeCode Available	1	5
DG-TTA: Out-of-domain Medical Image Segmentation through Augmentation and Descriptor-driven Domain Generalization and Test-Time Adaptation	Dec 11, 2023	Domain AdaptationDomain Generalization	CodeCode Available	1	5
CUTS: A Deep Learning and Topological Framework for Multigranular Unsupervised Medical Image Segmentation	Sep 23, 2022	Contrastive LearningImage Segmentation	CodeCode Available	1	5
Cutting-edge 3D Medical Image Segmentation Methods in 2020: Are Happy Families All Alike?	Jan 1, 2021	AllImage Segmentation	CodeCode Available	1	5
Pre-Training Auto-Generated Volumetric Shapes for 3D Medical Image Segmentation	Jun 1, 2023	Image SegmentationMedical Image Segmentation	CodeCode Available	1	5
CycleMix: A Holistic Strategy for Medical Image Segmentation from Scribble Supervision	Mar 3, 2022	Image SegmentationMedical Image Segmentation	CodeCode Available	1	5
Automatic Foot Ulcer Segmentation Using an Ensemble of Convolutional Neural Networks	Sep 3, 2021	DecoderImage Segmentation	CodeCode Available	1	5
DAE-Former: Dual Attention-guided Efficient Transformer for Medical Image Segmentation	Dec 27, 2022	Image SegmentationLesion Segmentation	CodeCode Available	1	5
A Location-Sensitive Local Prototype Network for Few-Shot Medical Image Segmentation	Mar 18, 2021	Image SegmentationMedical Image Segmentation	CodeCode Available	1	5
Implicit Neural Representations for Generative Modeling of Living Cell Shapes	Jul 13, 2022	Cell TrackingMedical Image Segmentation	CodeCode Available	1	5
ProMISe: Promptable Medical Image Segmentation using SAM	Mar 7, 2024	Image SegmentationLesion Segmentation	CodeCode Available	1	5
Promise:Prompt-driven 3D Medical Image Segmentation Using Pretrained Image Foundation Models	Oct 30, 2023	Image SegmentationMedical Image Segmentation	CodeCode Available	1	5
ACTION++: Improving Semi-supervised Medical Image Segmentation with Adaptive Anatomical Contrast	Apr 5, 2023	Contrastive LearningImage Segmentation	CodeCode Available	1	5
Importance Driven Continual Learning for Segmentation Across Domains	Apr 30, 2020	Brain SegmentationContinual Learning	CodeCode Available	1	5
One-Prompt to Segment All Medical Images	May 17, 2023	AllImage Segmentation	CodeCode Available	1	5
ProSFDA: Prompt Learning based Source-free Domain Adaptation for Medical Image Segmentation	Nov 21, 2022	Domain AdaptationImage Segmentation	CodeCode Available	1	5
DA-TransUNet: Integrating Spatial and Channel Dual Attention with Transformer U-Net for Medical Image Segmentation	Oct 19, 2023	Image SegmentationMedical Image Segmentation	CodeCode Available	1	5
ALPS: An Auto-Labeling and Pre-training Scheme for Remote Sensing Segmentation With Segment Anything Model	Jun 16, 2024	Image SegmentationMedical Image Segmentation	CodeCode Available	1	5
DB-SAM: Delving into High Quality Universal Medical Image Segmentation	Oct 5, 2024	Image SegmentationMedical Image Segmentation	CodeCode Available	1	5
DCSAU-Net: A Deeper and More Compact Split-Attention U-Net for Medical Image Segmentation	Feb 2, 2022	DecoderImage Segmentation	CodeCode Available	1	5
DC-UNet: Rethinking the U-Net Architecture with Dual Channel Efficient CNN for Medical Images Segmentation	May 31, 2020	DecoderImage Segmentation	CodeCode Available	1	5
An Embarrassingly Simple Consistency Regularization Method for Semi-Supervised Medical Image Segmentation	Feb 1, 2022	3D Medical Imaging SegmentationImage Segmentation	CodeCode Available	1	5

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All datasets Kvasir-SEG CVC-ClinicDB CVC-ColonDB ETIS-LARIBPOLYPDB Synapse multi-organ CT Automatic Cardiac Diagnosis Challenge (ACDC)MoNuSeg 2018 Data Science Bowl GlaS BKAI-IGH NeoPolyp-Small MICCAI 2015 Multi-Atlas Abdomen Labeling Challenge ACDC

Benchmark Results

#	Model	Metric	Claimed	Verified	Status
1	DUCK-Net	mean Dice	0.95	—	Unverified
2	EffiSegNet-B5	mean Dice	0.95	—	Unverified
3	EffiSegNet-B4	mean Dice	0.95	—	Unverified
4	SegMed	mean Dice	0.95	—	Unverified
5	FCB Former	mean Dice	0.94	—	Unverified
6	FCB-SwinV2 Transformer	mean Dice	0.94	—	Unverified
7	SEP	mean Dice	0.94	—	Unverified
8	LM-Net	mean Dice	0.94	—	Unverified
9	RAPUNet	mean Dice	0.94	—	Unverified
10	FCBFormer	mean Dice	0.94	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	DUCK-Net	mean Dice	0.97	—	Unverified
2	RAPUNet	mean Dice	0.96	—	Unverified
3	EMCAD	mean Dice	0.95	—	Unverified
4	Yolo-SAM 2	mean Dice	0.95	—	Unverified
5	RaBiT	mean Dice	0.95	—	Unverified
6	UGCANet	mean Dice	0.95	—	Unverified
7	ESFPNet-L	mean Dice	0.95	—	Unverified
8	FCBFormer	mean Dice	0.95	—	Unverified
9	SegMed	mean Dice	0.95	—	Unverified
10	DuAT	mean Dice	0.95	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	RAPUNet	mean Dice	0.95	—	Unverified
2	DUCK-Net	mean Dice	0.94	—	Unverified
3	EMCAD	mean Dice	0.92	—	Unverified
4	SegMed	mean Dice	0.92	—	Unverified
5	UniNet	mean Dice	0.92	—	Unverified
6	ProMISe	mean Dice	0.87	—	Unverified
7	Meta-Polyp	mean Dice	0.87	—	Unverified
8	ResUNet++ + TTA	mean Dice	0.85	—	Unverified
9	PVT-GCASCADE	mean Dice	0.83	—	Unverified
10	PVT-CASCADE	mean Dice	0.83	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	RAPUNet	mean Dice	0.96	—	Unverified
2	SegMed	mean Dice	0.94	—	Unverified
3	DUCK-Net	mean Dice	0.94	—	Unverified
4	EMCAD	mean Dice	0.92	—	Unverified
5	ProMISe	mean Dice	0.84	—	Unverified
6	RSAFormer	mean Dice	0.84	—	Unverified
7	ESFPNet-L	mean Dice	0.82	—	Unverified
8	DuAT	mean Dice	0.82	—	Unverified
9	PVT-CASCADE	mean Dice	0.8	—	Unverified
10	SSFormer-L	mean Dice	0.8	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	Interactive AI-SAM gt box	Avg DSC	90.66	—	Unverified
2	Medical SAM Adapter	Avg DSC	89.8	—	Unverified
3	MedSegDiff-v2	Avg DSC	89.5	—	Unverified
4	nnUNet	Avg DSC	88.8	—	Unverified
5	MedNeXt-L (5x5x5)	Avg DSC	88.76	—	Unverified
6	MIST	Avg DSC	86.92	—	Unverified
7	nnFormer	Avg DSC	86.57	—	Unverified
8	AgileFormer	Avg DSC	86.11	—	Unverified
9	MERIT	Avg DSC	84.9	—	Unverified
10	Automatic AI-SAM	Avg DSC	84.21	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	FCT	Avg DSC	94.26	—	Unverified
2	Interactive AI-SAM gt box	Avg DSC	93.89	—	Unverified
3	FCT	Avg DSC	93.02	—	Unverified
4	LHU-Net	Avg DSC	92.65	—	Unverified
5	MIST	Avg DSC	92.56	—	Unverified
6	MERIT	Avg DSC	92.32	—	Unverified
7	MERIT-GCASCADE	Avg DSC	92.23	—	Unverified
8	EMCAD	Avg DSC	92.12	—	Unverified
9	Automatic AI-SAM	Avg DSC	92.06	—	Unverified
10	nnFormer	Avg DSC	92.06	—	Unverified

#	Model	Metric	Claimed	Verified	Status
1	Stardist	F1	84.6	—	Unverified