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G-CASCADE: Efficient Cascaded Graph Convolutional Decoding for 2D Medical Image Segmentation

2023-10-24Code Available1· sign in to hype

Md Mostafijur Rahman, Radu Marculescu

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Abstract

In recent years, medical image segmentation has become an important application in the field of computer-aided diagnosis. In this paper, we are the first to propose a new graph convolution-based decoder namely, Cascaded Graph Convolutional Attention Decoder (G-CASCADE), for 2D medical image segmentation. G-CASCADE progressively refines multi-stage feature maps generated by hierarchical transformer encoders with an efficient graph convolution block. The encoder utilizes the self-attention mechanism to capture long-range dependencies, while the decoder refines the feature maps preserving long-range information due to the global receptive fields of the graph convolution block. Rigorous evaluations of our decoder with multiple transformer encoders on five medical image segmentation tasks (i.e., Abdomen organs, Cardiac organs, Polyp lesions, Skin lesions, and Retinal vessels) show that our model outperforms other state-of-the-art (SOTA) methods. We also demonstrate that our decoder achieves better DICE scores than the SOTA CASCADE decoder with 80.8% fewer parameters and 82.3% fewer FLOPs. Our decoder can easily be used with other hierarchical encoders for general-purpose semantic and medical image segmentation tasks.

Tasks

Benchmark Results

DatasetModelMetricClaimedVerifiedStatus
Automatic Cardiac Diagnosis Challenge (ACDC)MERIT-GCASCADEAvg DSC92.23Unverified
Automatic Cardiac Diagnosis Challenge (ACDC)PVT-GCASCADEAvg DSC91.95Unverified
CHASE_DB1PVT-GCASCADEDSC0.83Unverified
CHASE_DB1MERIT-GCASCADEDSC0.83Unverified
CVC-ClinicDBPVT-GCASCADEmean Dice0.95Unverified
CVC-ColonDBPVT-GCASCADEmean Dice0.83Unverified
DRIVEMERIT-GCASCADEmIoU0.71Unverified
DRIVEPVT-GCASCADEmIoU0.7Unverified
ISIC 2018PVT-GCASCADEDSC91.51Unverified
Kvasir-SEGPVT-GCASCADEmean Dice0.93Unverified
MICCAI 2015 Multi-Atlas Abdomen Labeling ChallengePVT-GCASCADEAvg DSC83.28Unverified
MICCAI 2015 Multi-Atlas Abdomen Labeling ChallengeMERIT-GCASCADEAvg DSC84.54Unverified

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