| End-to-end Multiple Instance Learning with Gradient Accumulation | Mar 8, 2022 | GPUMultiple Instance Learning | CodeCode Available | 1 | 5 |
| End-to-end Multiple Instance Learning for Whole-Slide Cytopathology of Urothelial Carcinoma | Jul 20, 2021 | Multiple Instance Learningwhole slide images | CodeCode Available | 1 | 5 |
| Pathology-and-genomics Multimodal Transformer for Survival Outcome Prediction | Jul 22, 2023 | Survival Predictionwhole slide images | CodeCode Available | 1 | 5 |
| PDL: Regularizing Multiple Instance Learning with Progressive Dropout Layers | Aug 19, 2023 | Multiple Instance LearningWeakly Supervised Classification | CodeCode Available | 1 | 5 |
| Deep Interactive Learning-based ovarian cancer segmentation of H&E-stained whole slide images to study morphological patterns of BRCA mutation | Mar 28, 2022 | Deep LearningSegmentation | CodeCode Available | 1 | 5 |
| De-Identification of Medical Imaging Data: A Comprehensive Tool for Ensuring Patient Privacy | Oct 16, 2024 | De-identificationwhole slide images | CodeCode Available | 1 | 5 |
| Multimodal Co-Attention Transformer for Survival Prediction in Gigapixel Whole Slide Images | Jan 1, 2021 | AttributeMultiple Instance Learning | CodeCode Available | 1 | 5 |
| Explainable AI for computational pathology identifies model limitations and tissue biomarkers | Sep 4, 2024 | Bias Detectioncounterfactual | CodeCode Available | 1 | 5 |
| Code-free development and deployment of deep segmentation models for digital pathology | Nov 16, 2021 | Active LearningDiagnostic | CodeCode Available | 1 | 5 |
| Accurate Spatial Gene Expression Prediction by integrating Multi-resolution features | Mar 12, 2024 | whole slide images | CodeCode Available | 1 | 5 |
| Federated Learning for Computational Pathology on Gigapixel Whole Slide Images | Sep 21, 2020 | Deep LearningDiagnostic | CodeCode Available | 1 | 5 |
| HMIL: Hierarchical Multi-Instance Learning for Fine-Grained Whole Slide Image Classification | Nov 12, 2024 | ClassificationContrastive Learning | CodeCode Available | 1 | 5 |
| Combining Graph Neural Network and Mamba to Capture Local and Global Tissue Spatial Relationships in Whole Slide Images | Jun 5, 2024 | Graph Neural NetworkMamba | CodeCode Available | 1 | 5 |
| FOCUS: Knowledge-enhanced Adaptive Visual Compression for Few-shot Whole Slide Image Classification | Nov 22, 2024 | DiagnosticFew-Shot Learning | CodeCode Available | 1 | 5 |
| From Whole-slide Image to Biomarker Prediction: A Protocol for End-to-End Deep Learning in Computational Pathology | Dec 18, 2023 | Classificationwhole slide images | CodeCode Available | 1 | 5 |
| OTSurv: A Novel Multiple Instance Learning Framework for Survival Prediction with Heterogeneity-aware Optimal Transport | Jun 25, 2025 | Multiple Instance LearningSurvival Prediction | CodeCode Available | 1 | 5 |
| Giga-SSL: Self-Supervised Learning for Gigapixel Images | Dec 6, 2022 | Multiple Instance LearningSelf-Supervised Learning | CodeCode Available | 1 | 5 |
| Gigapixel Whole-Slide Images Classification using Locally Supervised Learning | Jul 17, 2022 | ClassificationGPU | CodeCode Available | 1 | 5 |
| Quick Annotator: an open-source digital pathology based rapid image annotation tool | Jan 6, 2021 | whole slide images | CodeCode Available | 1 | 5 |
| Mapping the landscape of histomorphological cancer phenotypes using self-supervised learning on unlabeled, unannotated pathology slides | May 4, 2022 | Community DetectionRepresentation Learning | CodeCode Available | 1 | 5 |
| A Knowledge-enhanced Pathology Vision-language Foundation Model for Cancer Diagnosis | Dec 17, 2024 | DiagnosticSpecificity | CodeCode Available | 1 | 5 |
| CoNIC Challenge: Pushing the Frontiers of Nuclear Detection, Segmentation, Classification and Counting | Mar 11, 2023 | Nuclear SegmentationSegmentation | CodeCode Available | 1 | 5 |
| A Survey of Pathology Foundation Model: Progress and Future Directions | Apr 5, 2025 | BenchmarkingMultiple Instance Learning | CodeCode Available | 1 | 5 |
| SoftCTM: Cell detection by soft instance segmentation and consideration of cell-tissue interaction | Dec 19, 2023 | Cell DetectionInstance Segmentation | CodeCode Available | 1 | 5 |
| Unsupervised Foundation Model-Agnostic Slide-Level Representation Learning | Nov 20, 2024 | Mambamodel | CodeCode Available | 1 | 5 |
| Contextual unsupervised deep clustering in digital pathology | Jul 24, 2024 | ClusteringDeep Clustering | CodeCode Available | 1 | 5 |
| Exploring the Interplay Between Colorectal Cancer Subtypes Genomic Variants and Cellular Morphology: A Deep-Learning Approach | Mar 26, 2023 | Binary ClassificationClassification | CodeCode Available | 0 | 5 |
| MGCT: Mutual-Guided Cross-Modality Transformer for Survival Outcome Prediction using Integrative Histopathology-Genomic Features | Nov 20, 2023 | Prognosiswhole slide images | CodeCode Available | 0 | 5 |
| Beyond the Monitor: Mixed Reality Visualization and AI for Enhanced Digital Pathology Workflow | May 5, 2025 | DiagnosticMixed Reality | CodeCode Available | 0 | 5 |
| Masked Pre-Training of Transformers for Histology Image Analysis | Apr 14, 2023 | Multiple Instance LearningPrognosis | CodeCode Available | 0 | 5 |
| Maximum Mean Discrepancy Kernels for Predictive and Prognostic Modeling of Whole Slide Images | Jan 23, 2023 | Survival Analysiswhole slide images | CodeCode Available | 0 | 5 |
| A Dual-branch Self-supervised Representation Learning Framework for Tumour Segmentation in Whole Slide Images | Mar 20, 2023 | Medical Image AnalysisRepresentation Learning | CodeCode Available | 0 | 5 |
| Map3D: Registration Based Multi-Object Tracking on 3D Serial Whole Slide Images | Jun 10, 2020 | Multi-Object TrackingObject Tracking | CodeCode Available | 0 | 5 |
| LSA: Latent Style Augmentation Towards Stain-Agnostic Cervical Cancer Screening | Mar 9, 2025 | whole slide images | CodeCode Available | 0 | 5 |
| LymphoML: An interpretable artificial intelligence-based method identifies morphologic features that correlate with lymphoma subtype | Nov 16, 2023 | DiagnosticInterpretable Machine Learning | CodeCode Available | 0 | 5 |
| A Dilated Residual Hierarchically Fashioned Segmentation Framework for Extracting Gleason Tissues and Grading Prostate Cancer from Whole Slide Images | Nov 1, 2020 | Scene ParsingSemantic Segmentation | CodeCode Available | 0 | 5 |
| A Comparison of Deep Learning Methods for Cell Detection in Digital Cytology | Apr 9, 2025 | Cell DetectionComputational Efficiency | CodeCode Available | 0 | 5 |
| Leveraging image captions for selective whole slide image annotation | Jul 8, 2024 | DiversityImage Captioning | CodeCode Available | 0 | 5 |
| Learning to Segment Breast Biopsy Whole Slide Images | Sep 8, 2017 | DecoderDiagnostic | CodeCode Available | 0 | 5 |
| An End-to-end Pipeline for 3D Slide-wise Multi-stain Renal Pathology Registration | May 19, 2023 | whole slide images | CodeCode Available | 0 | 5 |
| Lesion-Aware Contrastive Representation Learning for Histopathology Whole Slide Images Analysis | Jun 27, 2022 | Contrastive LearningRepresentation Learning | CodeCode Available | 0 | 5 |
| Leveraging Transfer Learning and Multiple Instance Learning for HER2 Automatic Scoring of H\&E Whole Slide Images | Nov 5, 2024 | Multiple Instance LearningTransfer Learning | CodeCode Available | 0 | 5 |
| MAg: a simple learning-based patient-level aggregation method for detecting microsatellite instability from whole-slide images | Jan 13, 2022 | Prognosiswhole slide images | CodeCode Available | 0 | 5 |
| Automatic Labels are as Effective as Manual Labels in Biomedical Images Classification with Deep Learning | Jun 20, 2024 | whole slide images | CodeCode Available | 0 | 5 |
| KPIs 2024 Challenge: Advancing Glomerular Segmentation from Patch- to Slide-Level | Feb 11, 2025 | Image SegmentationSegmentation | CodeCode Available | 0 | 5 |
| A General Pipeline for Glomerulus Whole-Slide Image Segmentation | Nov 7, 2024 | Image SegmentationSegmentation | CodeCode Available | 0 | 5 |
| Automatic and explainable grading of meningiomas from histopathology images | Jul 19, 2021 | object-detectionObject Detection | CodeCode Available | 0 | 5 |
| Inter-Species Cell Detection: Datasets on pulmonary hemosiderophages in equine, human and feline specimens | Aug 19, 2021 | Cell DetectionDiagnostic | CodeCode Available | 0 | 5 |
| IRS: Incremental Relationship-guided Segmentation for Digital Pathology | May 28, 2025 | Continual LearningDomain Generalization | CodeCode Available | 0 | 5 |
| Learned Image Compression and Restoration for Digital Pathology | Mar 31, 2025 | DiagnosticImage Compression | CodeCode Available | 0 | 5 |