| An Automated Pipeline for Tumour-Infiltrating Lymphocyte Scoring in Breast Cancer | Nov 10, 2023 | whole slide images | CodeCode Available | 1 |
| Improving Mask R-CNN for Nuclei Instance Segmentation in Hematoxylin & Eosin-Stained Histological Images | Jul 20, 2021 | Instance SegmentationSegmentation | CodeCode Available | 1 |
| Incorporating intratumoral heterogeneity into weakly-supervised deep learning models via variance pooling | Jun 17, 2022 | Survival Predictionwhole slide images | CodeCode Available | 1 |
| Inference of captions from histopathological patches | Feb 7, 2022 | Diagnosticwhole slide images | CodeCode Available | 1 |
| Benchmarking Embedding Aggregation Methods in Computational Pathology: A Clinical Data Perspective | Jul 10, 2024 | BenchmarkingDiagnostic | CodeCode Available | 1 |
| Iterative Patch Selection for High-Resolution Image Recognition | Oct 24, 2022 | Autonomous DrivingGPU | CodeCode Available | 1 |
| HEALNet: Multimodal Fusion for Heterogeneous Biomedical Data | Nov 15, 2023 | Multimodal Deep LearningSurvival Analysis | CodeCode Available | 1 |
| A New Graph Node Classification Benchmark: Learning Structure from Histology Cell Graphs | Nov 11, 2022 | Graph LearningGraph Neural Network | CodeCode Available | 1 |
| High-performance Data Management for Whole Slide Image Analysis in Digital Pathology | Aug 10, 2023 | CPUGPU | CodeCode Available | 1 |
| Local Attention Graph-based Transformer for Multi-target Genetic Alteration Prediction | May 13, 2022 | Inductive BiasMultiple Instance Learning | CodeCode Available | 1 |
| Giga-SSL: Self-Supervised Learning for Gigapixel Images | Dec 6, 2022 | Multiple Instance LearningSelf-Supervised Learning | CodeCode Available | 1 |
| Mamba2MIL: State Space Duality Based Multiple Instance Learning for Computational Pathology | Aug 27, 2024 | feature selectionMultiple Instance Learning | CodeCode Available | 1 |
| From Whole-slide Image to Biomarker Prediction: A Protocol for End-to-End Deep Learning in Computational Pathology | Dec 18, 2023 | Classificationwhole slide images | CodeCode Available | 1 |
| Handcrafted Histological Transformer (H2T): Unsupervised Representation of Whole Slide Images | Feb 14, 2022 | Decision MakingDiagnostic | CodeCode Available | 1 |
| HIGT: Hierarchical Interaction Graph-Transformer for Whole Slide Image Analysis | Sep 14, 2023 | Graph Neural NetworkPrognosis | CodeCode Available | 1 |
| Fast and Accurate Gigapixel Pathological Image Classification with Hierarchical Distillation Multi-Instance Learning | Feb 28, 2025 | image-classificationImage Classification | CodeCode Available | 1 |
| Explainable AI for computational pathology identifies model limitations and tissue biomarkers | Sep 4, 2024 | Bias Detectioncounterfactual | CodeCode Available | 1 |
| Fast and Scalable Image Search For Histology | Jul 28, 2021 | Image RetrievalPrognosis | CodeCode Available | 1 |
| End-to-end Multiple Instance Learning for Whole-Slide Cytopathology of Urothelial Carcinoma | Jul 20, 2021 | Multiple Instance Learningwhole slide images | CodeCode Available | 1 |
| Accurate Spatial Gene Expression Prediction by integrating Multi-resolution features | Mar 12, 2024 | whole slide images | CodeCode Available | 1 |
| EasierPath: An Open-source Tool for Human-in-the-loop Deep Learning of Renal Pathology | Jul 28, 2020 | Deep Learningobject-detection | CodeCode Available | 1 |
| End-to-end Multiple Instance Learning with Gradient Accumulation | Mar 8, 2022 | GPUMultiple Instance Learning | CodeCode Available | 1 |
| Federated Learning for Computational Pathology on Gigapixel Whole Slide Images | Sep 21, 2020 | Deep LearningDiagnostic | CodeCode Available | 1 |
| Detection of prostate cancer in whole-slide images through end-to-end training with image-level labels | Jun 5, 2020 | GPUMultiple Instance Learning | CodeCode Available | 1 |
| De-Identification of Medical Imaging Data: A Comprehensive Tool for Ensuring Patient Privacy | Oct 16, 2024 | De-identificationwhole slide images | CodeCode Available | 1 |
| DGMIL: Distribution Guided Multiple Instance Learning for Whole Slide Image Classification | Jun 17, 2022 | Classificationimage-classification | CodeCode Available | 1 |
| Deep Learning-based Frozen Section to FFPE Translation | Jul 25, 2021 | Decision MakingDeep Learning | CodeCode Available | 1 |
| Deep Learning-based Computational Pathology Predicts Origins for Cancers of Unknown Primary | Jun 24, 2020 | Diagnosticwhole slide images | CodeCode Available | 1 |
| Deep Learning-Based Quantification of Pulmonary Hemosiderophages in Cytology Slides | Aug 12, 2019 | Deep LearningDiagnostic | CodeCode Available | 1 |
| DSCENet: Dynamic Screening and Clinical-Enhanced Multimodal Fusion for MPNs Subtype Classification | Jul 11, 2024 | Diagnosticwhole slide images | CodeCode Available | 1 |
| Edge-competing Pathological Liver Vessel Segmentation with Limited Labels | Aug 1, 2021 | Segmentationwhole slide images | CodeCode Available | 1 |
| Efficient subtyping of ovarian cancer histopathology whole slide images using active sampling in multiple instance learning | Feb 17, 2023 | ClassificationCPU | CodeCode Available | 1 |
| AdvMIL: Adversarial Multiple Instance Learning for the Survival Analysis on Whole-Slide Images | Dec 13, 2022 | Multiple Instance LearningPrognosis | CodeCode Available | 1 |
| EXACT: A collaboration toolset for algorithm-aided annotation of images with annotation version control | Apr 30, 2020 | ClusteringDeep Learning | CodeCode Available | 1 |
| A Knowledge-enhanced Pathology Vision-language Foundation Model for Cancer Diagnosis | Dec 17, 2024 | DiagnosticSpecificity | CodeCode Available | 1 |
| A Survey of Pathology Foundation Model: Progress and Future Directions | Apr 5, 2025 | BenchmarkingMultiple Instance Learning | CodeCode Available | 1 |
| Aligning Knowledge Concepts to Whole Slide Images for Precise Histopathology Image Analysis | Nov 27, 2024 | Language ModelingLanguage Modelling | CodeCode Available | 1 |
| FOCUS: Knowledge-enhanced Adaptive Visual Compression for Few-shot Whole Slide Image Classification | Nov 22, 2024 | DiagnosticFew-Shot Learning | CodeCode Available | 1 |
| EXAONEPath 1.0 Patch-level Foundation Model for Pathology | Aug 1, 2024 | modelSelf-Supervised Learning | CodeCode Available | 1 |
| Gigapixel Whole-Slide Images Classification using Locally Supervised Learning | Jul 17, 2022 | ClassificationGPU | CodeCode Available | 1 |
| Artifact Restoration in Histology Images with Diffusion Probabilistic Models | Jul 26, 2023 | Denoisingwhole slide images | CodeCode Available | 1 |
| H&E-adversarial network: a convolutional neural network to learn stain-invariant features through Hematoxylin & Eosin regression | Jan 17, 2022 | whole slide images | CodeCode Available | 1 |
| CryoNuSeg: A Dataset for Nuclei Instance Segmentation of Cryosectioned H&E-Stained Histological Images | Jan 2, 2021 | Instance SegmentationSegmentation | CodeCode Available | 1 |
| Data Efficient and Weakly Supervised Computational Pathology on Whole Slide Images | Apr 20, 2020 | ClusteringDiagnostic | CodeCode Available | 1 |
| Deep Interactive Learning-based ovarian cancer segmentation of H&E-stained whole slide images to study morphological patterns of BRCA mutation | Mar 28, 2022 | Deep LearningSegmentation | CodeCode Available | 1 |
| DTFD-MIL: Double-Tier Feature Distillation Multiple Instance Learning for Histopathology Whole Slide Image Classification | Mar 22, 2022 | image-classificationImage Classification | CodeCode Available | 1 |
| A Comprehensive Evaluation of Histopathology Foundation Models for Ovarian Cancer Subtype Classification | May 16, 2024 | Multiple Instance Learningwhole slide images | CodeCode Available | 1 |
| HMIL: Hierarchical Multi-Instance Learning for Fine-Grained Whole Slide Image Classification | Nov 12, 2024 | ClassificationContrastive Learning | CodeCode Available | 1 |
| HVTSurv: Hierarchical Vision Transformer for Patient-Level Survival Prediction from Whole Slide Image | Jun 30, 2023 | Multiple Instance LearningSurvival Prediction | CodeCode Available | 1 |
| Contextual unsupervised deep clustering in digital pathology | Jul 24, 2024 | ClusteringDeep Clustering | CodeCode Available | 1 |