| APACE: AlphaFold2 and advanced computing as a service for accelerated discovery in biophysics | Aug 15, 2023 | Drug DiscoveryPrediction | CodeCode Available | 0 | 5 |
| PSP: Million-level Protein Sequence Dataset for Protein Structure Prediction | Jun 24, 2022 | DiversityPrediction | CodeCode Available | 0 | 5 |
| Ankh: Optimized Protein Language Model Unlocks General-Purpose Modelling | Jan 16, 2023 | DiversityLanguage Modeling | CodeCode Available | 0 | 5 |
| Secondary Protein Structure Prediction Using Neural Networks | Aug 24, 2022 | PredictionProtein Structure Prediction | CodeCode Available | 0 | 5 |
| An Efficient MCMC Approach to Energy Function Optimization in Protein Structure Prediction | Nov 6, 2022 | CPUDrug Design | CodeCode Available | 0 | 5 |
| PDB-Struct: A Comprehensive Benchmark for Structure-based Protein Design | Nov 30, 2023 | Protein DesignProtein Structure Prediction | CodeCode Available | 0 | 5 |
| CPE-Pro: A Structure-Sensitive Deep Learning Method for Protein Representation and Origin Evaluation | Oct 21, 2024 | Language ModelingLanguage Modelling | CodeCode Available | 0 | 5 |
| MUST-CNN: A Multilayer Shift-and-Stitch Deep Convolutional Architecture for Sequence-based Protein Structure Prediction | May 10, 2016 | General Classificationimage-classification | CodeCode Available | 0 | 5 |
| pLDDT-Predictor: High-speed Protein Screening Using Transformer and ESM2 | Oct 11, 2024 | Computational EfficiencyProtein Structure Prediction | CodeCode Available | 0 | 5 |
| Human Genome Book: Words, Sentences and Paragraphs | Jan 23, 2025 | Protein Structure PredictionSentence segmentation | CodeCode Available | 0 | 5 |
| How pairwise coevolutionary models capture the collective residue variability in proteins | Jan 12, 2018 | Protein Structure Prediction | CodeCode Available | 0 | 5 |
| Exploring Post-Training Quantization of Protein Language Models | Oct 30, 2023 | Protein Structure PredictionQuantization | CodeCode Available | 0 | 5 |
| HelixFold: An Efficient Implementation of AlphaFold2 using PaddlePaddle | Jul 12, 2022 | Protein Structure Prediction | CodeCode Available | 0 | 5 |
| HelixFold-Single: MSA-free Protein Structure Prediction by Using Protein Language Model as an Alternative | Jul 28, 2022 | Language ModelingLanguage Modelling | CodeCode Available | 0 | 5 |
| MAS2HP: A Multi Agent System to Predict Protein Structure in 2D HP model | May 11, 2022 | Protein Structure Prediction | CodeCode Available | 0 | 5 |
| Generating Tertiary Protein Structures via an Interpretative Variational Autoencoder | Apr 8, 2020 | Protein Structure PredictionStochastic Optimization | CodeCode Available | 0 | 5 |
| Unsupervisedly Prompting AlphaFold2 for Few-Shot Learning of Accurate Folding Landscape and Protein Structure Prediction | Aug 20, 2022 | DenoisingFew-Shot Learning | CodeCode Available | 0 | 5 |
| Dihedral angle prediction using generative adversarial networks | Mar 29, 2018 | Density EstimationGenerative Adversarial Network | —Unverified | 0 | 0 |
| Dihedral Angle Adherence: Evaluating Protein Structure Predictions in the Absence of Experimental Data | Jul 9, 2024 | PredictionProtein Structure Prediction | —Unverified | 0 | 0 |
| A Survey of Deep Learning Methods in Protein Bioinformatics and its Impact on Protein Design | Jan 2, 2025 | Deep LearningPrediction | —Unverified | 0 | 0 |
| Artificial intelligence-aided protein engineering: from topological data analysis to deep protein language models | Jul 27, 2023 | Drug DiscoveryProtein Structure Prediction | —Unverified | 0 | 0 |
| AIS-INMACA: A Novel Integrated MACA Based Clonal Classifier for Protein Coding and Promoter Region Prediction | Mar 24, 2014 | Protein Structure Prediction | —Unverified | 0 | 0 |
| Deep Spatio-Temporal Architectures and Learning for Protein Structure Prediction | Dec 1, 2012 | BIG-bench Machine LearningPrediction | —Unverified | 0 | 0 |
| Deep Reinforcement Learning for Modelling Protein Complexes | Mar 11, 2024 | Combinatorial OptimizationDeep Reinforcement Learning | —Unverified | 0 | 0 |
| A Protein Structure Prediction Approach Leveraging Transformer and CNN Integration | Feb 29, 2024 | Language ModelingLanguage Modelling | —Unverified | 0 | 0 |
