SOTAVerified

Protein Structure Prediction

Image credit: FastFold: Reducing AlphaFold Training Time from 11 Days to 67 Hours

Papers

Recently AddedMost HypedMost ActiveNeeds VerificationMost Verified

Showing 51–75 of 188 papers

TitleStatusHype
A Comprehensive Review of Generative AI in Healthcare—0
Finding optimal finite biological sequences over finite alphabets: the OptiFin toolbox—0
Deep Learning in Computational Biology: Advancements, Challenges, and Future Outlook—0
Applications of Knot Theory for the Improvement of the AlphaFold Protein Database—0
Deep Learning for Computational Chemistry—0
DeepQA: Improving the estimation of single protein model quality with deep belief networks—0
Deep Reinforcement Learning for Modelling Protein Complexes—0
Deep Spatio-Temporal Architectures and Learning for Protein Structure Prediction—0
Artificial intelligence-aided protein engineering: from topological data analysis to deep protein language models—0
Deep Learning applications for COVID-19—0
Dihedral Angle Adherence: Evaluating Protein Structure Predictions in the Absence of Experimental Data—0
Dihedral angle prediction using generative adversarial networks—0
AI-guided Antibiotic Discovery Pipeline from Target Selection to Compound Identification—0
AlphaFolding: 4D Diffusion for Dynamic Protein Structure Prediction with Reference and Motion Guidance—0
DeepFoldit -- A Deep Reinforcement Learning Neural Network Folding Proteins—0
Decoy Selection for Protein Structure Prediction Via Extreme Gradient Boosting and Ranking—0
An Investigation in Optimal Encoding of Protein Primary Sequence for Structure Prediction by Artificial Neural Networks—0
Data Resources for Structural Bioinformatics—0
CrysFormer: Protein Structure Prediction via 3d Patterson Maps and Partial Structure Attention—0
A Hybrid Monte Carlo Ant Colony Optimization Approach for Protein Structure Prediction in the HP Model—0
FFF: Fragment-Guided Flexible Fitting for Building Complete Protein Structures—0
FoldExplorer: Fast and Accurate Protein Structure Search with Sequence-Enhanced Graph Embedding—0
CrysAtom: Distributed Representation of Atoms for Crystal Property Prediction—0
cryoSPHERE: Single-particle heterogeneous reconstruction from cryo EM—0
A new hybrid genetic algorithm for protein structure prediction on the 2D triangular lattice—0
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All datasetsCASPSeqCASPSimSeqPaenSeqUniProtSeq

Benchmark Results

#ModelMetricClaimedVerifiedStatus
1GAL 125MValidation perplexity20.62—Unverified
2GAL 1.3BValidation perplexity17.58—Unverified
3GAL 6.7BValidation perplexity17.29—Unverified
4GAL 30BValidation perplexity17.27—Unverified
5GAL 120BValidation perplexity17.26—Unverified
#ModelMetricClaimedVerifiedStatus
1GAL 125MValidation perplexity19.18—Unverified
2GAL 1.3BValidation perplexity17.04—Unverified
3GAL 6.7BValidation perplexity16.35—Unverified
4GAL 30BValidation perplexity15.42—Unverified
5GAL 120BValidation perplexity12.77—Unverified
#ModelMetricClaimedVerifiedStatus
1GAL 125MValidation perplexity16.35—Unverified
2GAL 1.3BValidation perplexity12.53—Unverified
3GAL 6.7BValidation perplexity7.76—Unverified
4GAL 30BValidation perplexity4.28—Unverified
5GAL 120BValidation perplexity3.14—Unverified
#ModelMetricClaimedVerifiedStatus
1GAL 125MValidation perplexity19.05—Unverified
2GAL 1.3BValidation perplexity15.82—Unverified
3GAL 6.7BValidation perplexity11.58—Unverified
4GAL 30BValidation perplexity8.23—Unverified
5GAL 120BValidation perplexity5.54—Unverified