SOTAVerified

Protein Structure Prediction

Image credit: FastFold: Reducing AlphaFold Training Time from 11 Days to 67 Hours

Papers

Recently AddedMost HypedMost ActiveNeeds VerificationMost Verified

Showing 26–50 of 188 papers

TitleStatusHype
Human Genome Book: Words, Sentences and ParagraphsCode0
Computational Protein Science in the Era of Large Language Models (LLMs)—0
Generative diffusion model with inverse renormalization group flowsCode1
A Survey of Deep Learning Methods in Protein Bioinformatics and its Impact on Protein Design—0
Protein Structure Prediction in the 3D HP Model Using Deep Reinforcement Learning—0
Applications of Knot Theory for the Improvement of the AlphaFold Protein Database—0
Training on test proteins improves fitness, structure, and function predictionCode2
Ratio law: mathematical descriptions for a universal relationship between AI performance and input samples—0
Beyond Current Boundaries: Integrating Deep Learning and AlphaFold for Enhanced Protein Structure Prediction from Low-Resolution Cryo-EM Maps—0
FoldMark: Protecting Protein Generative Models with WatermarkingCode1
CPE-Pro: A Structure-Sensitive Deep Learning Method for Protein Representation and Origin EvaluationCode0
Proteins with alternative folds reveal blind spots in AlphaFold-based protein structure prediction—0
pLDDT-Predictor: High-speed Protein Screening Using Transformer and ESM2Code0
DeepProtein: Deep Learning Library and Benchmark for Protein Sequence LearningCode1
Recent advances in interpretable machine learning using structure-based protein representations—0
CrysAtom: Distributed Representation of Atoms for Crystal Property Prediction—0
Leveraging Deep Generative Model For Computational Protein Design And Optimization—0
Technical Report of HelixFold3 for Biomolecular Structure Prediction—0
MultiMed: Massively Multimodal and Multitask Medical Understanding—0
AlphaFolding: 4D Diffusion for Dynamic Protein Structure Prediction with Reference and Motion Guidance—0
Dihedral Angle Adherence: Evaluating Protein Structure Predictions in the Absence of Experimental Data—0
MSAGPT: Neural Prompting Protein Structure Prediction via MSA Generative Pre-TrainingCode1
Benchmarking AlphaFold3's protein-protein complex accuracy and machine learning prediction reliability for binding free energy changes upon mutation—0
cryoSPHERE: Single-particle heterogeneous reconstruction from cryo EM—0
Accurate and efficient protein embedding using multi-teacher distillation learningCode1
Show:102550
← PrevPage 2 of 8Next →
All datasetsCASPSeqCASPSimSeqPaenSeqUniProtSeq

Benchmark Results

#ModelMetricClaimedVerifiedStatus
1GAL 125MValidation perplexity20.62—Unverified
2GAL 1.3BValidation perplexity17.58—Unverified
3GAL 6.7BValidation perplexity17.29—Unverified
4GAL 30BValidation perplexity17.27—Unverified
5GAL 120BValidation perplexity17.26—Unverified
#ModelMetricClaimedVerifiedStatus
1GAL 125MValidation perplexity19.18—Unverified
2GAL 1.3BValidation perplexity17.04—Unverified
3GAL 6.7BValidation perplexity16.35—Unverified
4GAL 30BValidation perplexity15.42—Unverified
5GAL 120BValidation perplexity12.77—Unverified
#ModelMetricClaimedVerifiedStatus
1GAL 125MValidation perplexity16.35—Unverified
2GAL 1.3BValidation perplexity12.53—Unverified
3GAL 6.7BValidation perplexity7.76—Unverified
4GAL 30BValidation perplexity4.28—Unverified
5GAL 120BValidation perplexity3.14—Unverified
#ModelMetricClaimedVerifiedStatus
1GAL 125MValidation perplexity19.05—Unverified
2GAL 1.3BValidation perplexity15.82—Unverified
3GAL 6.7BValidation perplexity11.58—Unverified
4GAL 30BValidation perplexity8.23—Unverified
5GAL 120BValidation perplexity5.54—Unverified