| Protein structure generation via folding diffusion | Sep 30, 2022 | DenoisingProtein Structure Prediction | CodeCode Available | 2 |
| State-specific protein-ligand complex structure prediction with a multi-scale deep generative model | Sep 30, 2022 | BenchmarkingBlind Docking | CodeCode Available | 2 |
| FastFold: Reducing AlphaFold Training Time from 11 Days to 67 Hours | Mar 2, 2022 | Protein Structure PredictionTranslation | CodeCode Available | 2 |
| ProteinBERT: a universal deep-learning model of protein sequence and function | Feb 10, 2022 | Language ModelingLanguage Modelling | CodeCode Available | 2 |
| Distribution-Free, Risk-Controlling Prediction Sets | Jan 7, 2021 | BIG-bench Machine LearningClassification | CodeCode Available | 2 |
| Conformation-Aware Structure Prediction of Antigen-Recognizing Immune Proteins | Jul 11, 2025 | PredictionProtein Structure Prediction | CodeCode Available | 1 |
| Towards Interpretable Protein Structure Prediction with Sparse Autoencoders | Mar 11, 2025 | PredictionProtein Structure Prediction | CodeCode Available | 1 |
| Deep Learning of Proteins with Local and Global Regions of Disorder | Feb 17, 2025 | Protein Structure Prediction | CodeCode Available | 1 |
| Generative diffusion model with inverse renormalization group flows | Jan 15, 2025 | Audio SynthesisDenoising | CodeCode Available | 1 |
| FoldMark: Protecting Protein Generative Models with Watermarking | Oct 27, 2024 | Drug DiscoveryProtein Structure Prediction | CodeCode Available | 1 |
