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Protein Language Model

Use of protein language models in protein property prediction

Papers

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Showing 51–73 of 73 papers

TitleStatusHype
Diffusion on language model encodings for protein sequence generation—0
A Protein Structure Prediction Approach Leveraging Transformer and CNN Integration—0
ProtIR: Iterative Refinement between Retrievers and Predictors for Protein Function Annotation—0
Decoupled Sequence and Structure Generation for Realistic Antibody DesignCode0
xTrimoPGLM: Unified 100B-Scale Pre-trained Transformer for Deciphering the Language of Protein—0
CrossBind: Collaborative Cross-Modal Identification of Protein Nucleic-Acid-Binding ResiduesCode0
Protein Language Model-Powered 3D Ligand Binding Site Prediction from Protein Sequence—0
ESM-NBR: fast and accurate nucleic acid-binding residue prediction via protein language model feature representation and multi-task learningCode0
ProPath: Disease-Specific Protein Language Model for Variant Pathogenicity—0
ForceGen: End-to-end de novo protein generation based on nonlinear mechanical unfolding responses using a protein language diffusion model—0
Cognate Transformer for Automated Phonological Reconstruction and Cognate Reflex PredictionCode0
pLMFPPred: a novel approach for accurate prediction of functional peptides integrating embedding from pre-trained protein language model and imbalanced learning—0
ProtiGeno: a prokaryotic short gene finder using protein language modelsCode0
Vaxformer: Antigenicity-controlled Transformer for Vaccine Design Against SARS-CoV-2Code0
CCPL: Cross-modal Contrastive Protein Learning—0
LEP-AD: Language Embedding of Proteins and Attention to Drugs predicts drug target interactionsCode0
Ankh: Optimized Protein Language Model Unlocks General-Purpose ModellingCode0
xTrimoABFold: De novo Antibody Structure Prediction without MSA—0
Protein language model rescue mutations highlight variant effects and structure in clinically relevant genesCode0
Machine learning can guide experimental approaches for protein digestibility estimations—0
HelixFold-Single: MSA-free Protein Structure Prediction by Using Protein Language Model as an AlternativeCode0
HMD-AMP: Protein Language-Powered Hierarchical Multi-label Deep Forest for Annotating Antimicrobial Peptides—0
MSA TransformerCode0
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