SOTAVerified

Protein Function Prediction

For GO terms prediction, given the specific function prediction instruction and a protein sequence, models characterize the protein functions using the GO terms presented in three different domains (cellular component, biological process, and molecular function).

Papers

Showing 4150 of 79 papers

TitleStatusHype
Deep Robust Framework for Protein Function Prediction using Variable-Length Protein Sequences0
Geometric Self-Supervised Pretraining on 3D Protein Structures using Subgraphs0
GoBERT: Gene Ontology Graph Informed BERT for Universal Gene Function Prediction0
Hashing for Protein Structure Similarity Search0
ProteinEngine: Empower LLM with Domain Knowledge for Protein Engineering0
Protein-Mamba: Biological Mamba Models for Protein Function Prediction0
ProteinRPN: Towards Accurate Protein Function Prediction with Graph-Based Region Proposals0
ProtNN: Fast and Accurate Nearest Neighbor Protein Function Prediction based on Graph Embedding in Structural and Topological Space0
ProTranslator: zero-shot protein function prediction using textual description0
ProtTeX: Structure-In-Context Reasoning and Editing of Proteins with Large Language Models0
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Benchmark Results

#ModelMetricClaimedVerifiedStatus
1GAL 120BROUGE-L0.25Unverified
2GAL 30BROUGE-L0.14Unverified
3GAL 6.7BROUGE-L0.11Unverified
4GAL 1.3BROUGE-L0.07Unverified
5GAL 125MROUGE-L0.06Unverified
#ModelMetricClaimedVerifiedStatus
1GAL 120BROUGE-L0.27Unverified
2GAL 30BROUGE-L0.2Unverified
3GAL 6.7BROUGE-L0.14Unverified
4GAL 1.3BROUGE-L0.08Unverified
5GAL 125MROUGE-L0.07Unverified
#ModelMetricClaimedVerifiedStatus
1GAL 120BROUGE-L0.25Unverified
2GAL 30BROUGE-L0.19Unverified
3GAL 6.7BROUGE-L0.11Unverified
4GAL 1.3BROUGE-L0.08Unverified
5GAL 125MROUGE-L0.06Unverified