SOTAVerified

Protein Function Prediction

For GO terms prediction, given the specific function prediction instruction and a protein sequence, models characterize the protein functions using the GO terms presented in three different domains (cellular component, biological process, and molecular function).

Papers

Showing 2130 of 79 papers

TitleStatusHype
ProteinEngine: Empower LLM with Domain Knowledge for Protein Engineering0
HeMeNet: Heterogeneous Multichannel Equivariant Network for Protein Multitask Learning0
Advances of Deep Learning in Protein Science: A Comprehensive Survey0
Structure-Informed Protein Language ModelCode1
Endowing Protein Language Models with Structural KnowledgeCode1
Protein 3D Graph Structure Learning for Robust Structure-based Protein Property Prediction0
InstructProtein: Aligning Human and Protein Language via Knowledge Instruction0
Insights Into the Inner Workings of Transformer Models for Protein Function PredictionCode1
Contrastive Learning for Non-Local Graphs with Multi-Resolution Structural Views0
Biomedical Knowledge Graph Embeddings with Negative StatementsCode0
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Benchmark Results

#ModelMetricClaimedVerifiedStatus
1GAL 120BROUGE-L0.25Unverified
2GAL 30BROUGE-L0.14Unverified
3GAL 6.7BROUGE-L0.11Unverified
4GAL 1.3BROUGE-L0.07Unverified
5GAL 125MROUGE-L0.06Unverified
#ModelMetricClaimedVerifiedStatus
1GAL 120BROUGE-L0.27Unverified
2GAL 30BROUGE-L0.2Unverified
3GAL 6.7BROUGE-L0.14Unverified
4GAL 1.3BROUGE-L0.08Unverified
5GAL 125MROUGE-L0.07Unverified
#ModelMetricClaimedVerifiedStatus
1GAL 120BROUGE-L0.25Unverified
2GAL 30BROUGE-L0.19Unverified
3GAL 6.7BROUGE-L0.11Unverified
4GAL 1.3BROUGE-L0.08Unverified
5GAL 125MROUGE-L0.06Unverified