SOTAVerified

Protein Function Prediction

For GO terms prediction, given the specific function prediction instruction and a protein sequence, models characterize the protein functions using the GO terms presented in three different domains (cellular component, biological process, and molecular function).

Papers

Showing 2130 of 79 papers

TitleStatusHype
STELLA: Towards Protein Function Prediction with Multimodal LLMs Integrating Sequence-Structure Representations0
MSNGO: multi-species protein function annotation based on 3D protein structure and network propagationCode0
evoBPE: Evolutionary Protein Sequence TokenizationCode0
ProtTeX: Structure-In-Context Reasoning and Editing of Proteins with Large Language Models0
Computational Protein Science in the Era of Large Language Models (LLMs)0
GoBERT: Gene Ontology Graph Informed BERT for Universal Gene Function Prediction0
ProtCLIP: Function-Informed Protein Multi-Modal Learning0
Multi-modal Representation Learning Enables Accurate Protein Function Prediction in Low-Data SettingCode0
SCOP: A Sequence-Structure Contrast-Aware Framework for Protein Function PredictionCode0
Hashing for Protein Structure Similarity Search0
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Benchmark Results

#ModelMetricClaimedVerifiedStatus
1GAL 120BROUGE-L0.25Unverified
2GAL 30BROUGE-L0.14Unverified
3GAL 6.7BROUGE-L0.11Unverified
4GAL 1.3BROUGE-L0.07Unverified
5GAL 125MROUGE-L0.06Unverified
#ModelMetricClaimedVerifiedStatus
1GAL 120BROUGE-L0.27Unverified
2GAL 30BROUGE-L0.2Unverified
3GAL 6.7BROUGE-L0.14Unverified
4GAL 1.3BROUGE-L0.08Unverified
5GAL 125MROUGE-L0.07Unverified
#ModelMetricClaimedVerifiedStatus
1GAL 120BROUGE-L0.25Unverified
2GAL 30BROUGE-L0.19Unverified
3GAL 6.7BROUGE-L0.11Unverified
4GAL 1.3BROUGE-L0.08Unverified
5GAL 125MROUGE-L0.06Unverified