SOTAVerified

Protein Function Prediction

For GO terms prediction, given the specific function prediction instruction and a protein sequence, models characterize the protein functions using the GO terms presented in three different domains (cellular component, biological process, and molecular function).

Papers

Showing 1120 of 79 papers

TitleStatusHype
Multi-modal Representation Learning Enables Accurate Protein Function Prediction in Low-Data SettingCode0
SCOP: A Sequence-Structure Contrast-Aware Framework for Protein Function PredictionCode0
Hashing for Protein Structure Similarity Search0
DeepProtein: Deep Learning Library and Benchmark for Protein Sequence LearningCode1
Protein-Mamba: Biological Mamba Models for Protein Function Prediction0
ProteinRPN: Towards Accurate Protein Function Prediction with Graph-Based Region Proposals0
Autoregressive Enzyme Function Prediction with Multi-scale Multi-modality Fusion0
A Vectorization Method Induced By Maximal Margin Classification For Persistent Diagrams0
Geometric Self-Supervised Pretraining on 3D Protein Structures using Subgraphs0
ProtFAD: Introducing function-aware domains as implicit modality towards protein function predictionCode0
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Benchmark Results

#ModelMetricClaimedVerifiedStatus
1GAL 120BROUGE-L0.25Unverified
2GAL 30BROUGE-L0.14Unverified
3GAL 6.7BROUGE-L0.11Unverified
4GAL 1.3BROUGE-L0.07Unverified
5GAL 125MROUGE-L0.06Unverified
#ModelMetricClaimedVerifiedStatus
1GAL 120BROUGE-L0.27Unverified
2GAL 30BROUGE-L0.2Unverified
3GAL 6.7BROUGE-L0.14Unverified
4GAL 1.3BROUGE-L0.08Unverified
5GAL 125MROUGE-L0.07Unverified
#ModelMetricClaimedVerifiedStatus
1GAL 120BROUGE-L0.25Unverified
2GAL 30BROUGE-L0.19Unverified
3GAL 6.7BROUGE-L0.11Unverified
4GAL 1.3BROUGE-L0.08Unverified
5GAL 125MROUGE-L0.06Unverified