| GPU accelerated enumeration and exploration of HP model genotype-phenotype maps for protein folding | Aug 1, 2020 | CPUGPU | —Unverified | 0 |
| Characterizing SARS-CoV-2 mutations in the United States | Jul 24, 2020 | Protein Folding | —Unverified | 0 |
| Intrinsic-Extrinsic Convolution and Pooling for Learning on 3D Protein Structures | Jul 13, 2020 | Protein Folding | CodeCode Available | 1 |
| A fast and simple modification of Newton's method helping to avoid saddle points | Jun 2, 2020 | Protein FoldingStochastic Optimization | CodeCode Available | 0 |
| First-Passage Time Distributions in Two-State Protein Folding Kinetics: Exploring the Native-Like States vs Overcoming the Free Energy Barrier | May 27, 2020 | Protein Folding | —Unverified | 0 |
| TG-GAN: Continuous-time Temporal Graph Generation with Deep Generative Models | May 17, 2020 | AttributeGenerative Adversarial Network | CodeCode Available | 0 |
| Effect of protein structure on evolution of cotranslational folding | Apr 7, 2020 | Protein FoldingTranslation | —Unverified | 0 |
| Neighborhood Information-based Probabilistic Algorithm for Network Disintegration | Mar 8, 2020 | Protein Folding | —Unverified | 0 |
| PolyFold: an interactive visual simulator for distance-based protein folding | Feb 14, 2020 | Protein FoldingProtein Structure Prediction | CodeCode Available | 1 |
| Adaptive Markov State Model estimation using short reseeding trajectories | Dec 12, 2019 | Protein Folding | —Unverified | 0 |
| Generative Models for Graph-Based Protein Design | Dec 1, 2019 | Protein DesignProtein Folding | CodeCode Available | 0 |
| Machine learning for protein folding and dynamics | Nov 22, 2019 | BIG-bench Machine LearningProtein Folding | —Unverified | 0 |
| A Tale of Two Desolvation Potentials: An Investigation of Protein Behavior Under High Hydrostatic Pressure | Nov 15, 2019 | Protein Folding | —Unverified | 0 |
| Using Residual Dipolar Couplings from Two Alignment Media to Detect Structural Homology | Nov 6, 2019 | Protein Folding | —Unverified | 0 |
| Machine Learning and Big Scientific Data | Oct 12, 2019 | BIG-bench Machine LearningDeep Learning | —Unverified | 0 |
| A topological study of protein folding kinetics | Sep 28, 2019 | Protein Folding | —Unverified | 0 |
| GraphQA: Protein Model Quality Assessment using Graph Convolutional Network | Sep 25, 2019 | Computational EfficiencyProtein Folding | CodeCode Available | 0 |
| Message Scheduling for Performant, Many-Core Belief Propagation | Sep 24, 2019 | GPUProtein Folding | CodeCode Available | 0 |
| DeepDriveMD: Deep-Learning Driven Adaptive Molecular Simulations for Protein Folding | Sep 17, 2019 | Deep LearningProtein Folding | CodeCode Available | 0 |
| Weighted persistent homology for osmolyte molecular aggregation and hydrogen-bonding network analysis | Jul 14, 2019 | Protein Folding | —Unverified | 0 |
| Learning Protein Structure with a Differentiable Simulator | May 1, 2019 | Protein Folding | —Unverified | 0 |
| Two-phase protein folding optimization on a three-dimensional AB off-lattice model | Mar 4, 2019 | Protein Folding | —Unverified | 0 |
| Forming native shortcut networks to simulate protein folding | Feb 17, 2019 | Protein Folding | —Unverified | 0 |
| Geometric constraints in protein folding | Dec 23, 2018 | Protein Folding | CodeCode Available | 0 |
| FoldingZero: Protein Folding from Scratch in Hydrophobic-Polar Model | Dec 3, 2018 | Deep Reinforcement LearningProtein Folding | —Unverified | 0 |
