| RapidDock: Unlocking Proteome-scale Molecular Docking | Oct 16, 2024 | Drug DiscoveryGPU | —Unverified | 0 | 0 |
| Rare-Event Sampling of Epigenetic Landscapes and Phenotype Transitions | Dec 29, 2017 | Protein Folding | —Unverified | 0 | 0 |
| Recursive Decomposition for Nonconvex Optimization | Nov 8, 2016 | Combinatorial Optimizationgraph partitioning | —Unverified | 0 | 0 |
| Rethinking the protein folding problem from a new perspective | Oct 10, 2022 | Protein Folding | —Unverified | 0 | 0 |
| RoMA: a Method for Neural Network Robustness Measurement and Assessment | Oct 21, 2021 | Protein Folding | —Unverified | 0 | 0 |
| ScaleFold: Reducing AlphaFold Initial Training Time to 10 Hours | Apr 17, 2024 | Protein Folding | —Unverified | 0 | 0 |
| Selection originating from protein stability/foldability: Relationships between protein folding free energy, sequence ensemble, and fitness | Dec 30, 2016 | Protein Folding | —Unverified | 0 | 0 |
| Selectivity of Protein Interactions Stimulated by Terahertz Signals | Jul 4, 2022 | Protein Folding | —Unverified | 0 | 0 |
| Self-folding Self-replication | Aug 13, 2024 | Protein Folding | —Unverified | 0 | 0 |
| SGNet: Folding Symmetrical Protein Complex with Deep Learning | Mar 7, 2024 | Deep LearningProtein Folding | —Unverified | 0 | 0 |
| Sign Gradient Descent Algorithms for Kinetostatic Protein Folding | Aug 14, 2023 | Protein Folding | —Unverified | 0 | 0 |
| Simultaneous Modeling of Protein Conformation and Dynamics via Autoregression | May 23, 2025 | Protein Folding | —Unverified | 0 | 0 |
| Solvent Effects in the Helix-Coil Transition Model can explain the Unusual Biophysics of Intrinsically Disordered Proteins | Jul 14, 2015 | Protein FoldingSpecificity | —Unverified | 0 | 0 |
| Solving the HP model with Nested Monte Carlo Search | Jan 23, 2023 | Protein Folding | —Unverified | 0 | 0 |
| Spectral Map for Slow Collective Variables, Markovian Dynamics, and Transition State Ensembles | Sep 10, 2024 | Protein Folding | —Unverified | 0 | 0 |
| Structural Learning for Template-free Protein Folding | Nov 6, 2013 | Protein Folding | —Unverified | 0 | 0 |
| Structure-based prediction of protein-folding transition paths | Jul 27, 2016 | PredictionProtein Folding | —Unverified | 0 | 0 |
| Terahertz Induced Protein Interactions in a Random Medium | Oct 23, 2023 | Protein Folding | —Unverified | 0 | 0 |
| The finite size effects and the two-state paradigm of protein folding | Oct 26, 2020 | Protein Folding | —Unverified | 0 | 0 |
| The impact of hydrodynamic interactions on protein folding rates depends on temperature | Dec 12, 2017 | FrictionProtein Folding | —Unverified | 0 | 0 |
| The known unknowns of the Hsp90 chaperone | Aug 31, 2023 | Drug DesignKnown Unknowns | —Unverified | 0 | 0 |
| The Origin of Mutational Epistasis | Apr 5, 2024 | Protein Folding | —Unverified | 0 | 0 |
| Thermodynamics of Protein Folding | Jul 5, 2023 | Protein FoldingProtein Structure Prediction | —Unverified | 0 | 0 |
| The role of hydrophobic interactions in folding of β-sheets | Sep 16, 2020 | Protein Folding | —Unverified | 0 | 0 |
| The short-cut network within protein residue networks | Aug 12, 2015 | Protein Folding | —Unverified | 0 | 0 |