| TorchProteinLibrary: A computationally efficient, differentiable representation of protein structure | Nov 23, 2018 | Protein FoldingReinforcement Learning (RL) | CodeCode Available | 0 |
| CoHSI III: Long proteins and implications for protein evolution | Oct 19, 2018 | Protein Folding | —Unverified | 0 |
| Simultaneous Coherent Structure Coloring facilitates interpretable clustering of scientific data by amplifying dissimilarity | Jul 12, 2018 | ClusteringProtein Folding | CodeCode Available | 0 |
| On the scale-free nature of RNA secondary structure networks | Jun 30, 2018 | Protein Folding | —Unverified | 0 |
| A method for partitioning the information contained in a protein sequence between its structure and function | May 23, 2018 | Protein Folding | —Unverified | 0 |
| Doing the impossible: Why neural networks can be trained at all | May 13, 2018 | AllProtein Folding | —Unverified | 0 |
| Rare-Event Sampling of Epigenetic Landscapes and Phenotype Transitions | Dec 29, 2017 | Protein Folding | —Unverified | 0 |
| Folding with a protein's native shortcut network | Dec 13, 2017 | Protein Folding | —Unverified | 0 |
| The impact of hydrodynamic interactions on protein folding rates depends on temperature | Dec 12, 2017 | FrictionProtein Folding | —Unverified | 0 |
| Variational Encoding of Complex Dynamics | Nov 23, 2017 | Protein FoldingTime Series | CodeCode Available | 0 |
| Dimensionality reduction methods for molecular simulations | Oct 29, 2017 | ClusteringDimensionality Reduction | —Unverified | 0 |
| Protein Folding Optimization using Differential Evolution Extended with Local Search and Component Reinitialization | Oct 19, 2017 | Protein Folding | —Unverified | 0 |
| Evidence of evolutionary selection for co-translational folding | Oct 10, 2017 | Protein FoldingTranslation | —Unverified | 0 |
| A glass-box interactive machine learning approach for solving NP-hard problems with the human-in-the-loop | Aug 3, 2017 | Protein FoldingTraveling Salesman Problem | —Unverified | 0 |
| Prediction of amino acid side chain conformation using a deep neural network | Jul 26, 2017 | PredictionProtein Design | —Unverified | 0 |
| Controllability analysis and control synthesis for the ribosome flow model | May 17, 2017 | Protein FoldingTranslation | —Unverified | 0 |
| Analysis and prediction of protein folding energy changes upon mutation by element specific persistent homology | Mar 31, 2017 | Protein Folding | —Unverified | 0 |
| Intra-protein binding peptide fragments have specific and intrinsic sequence patterns | Feb 26, 2017 | Protein Folding | —Unverified | 0 |
| Selection originating from protein stability/foldability: Relationships between protein folding free energy, sequence ensemble, and fitness | Dec 30, 2016 | Protein Folding | —Unverified | 0 |
| Recursive Decomposition for Nonconvex Optimization | Nov 8, 2016 | Combinatorial Optimizationgraph partitioning | —Unverified | 0 |
| Normalizing Flows on Riemannian Manifolds | Nov 7, 2016 | Density EstimationProtein Folding | —Unverified | 0 |
| Accurate De Novo Prediction of Protein Contact Map by Ultra-Deep Learning Model | Sep 2, 2016 | PredictionProtein Folding | CodeCode Available | 0 |
| Cooperativity and modularity in protein folding | Aug 30, 2016 | Protein Folding | —Unverified | 0 |
| Structure-based prediction of protein-folding transition paths | Jul 27, 2016 | PredictionProtein Folding | —Unverified | 0 |
| A Parallel Trajectory Swapping Wang - Landau Study Of The HP Protein Model | Jul 12, 2016 | Protein Folding | CodeCode Available | 0 |
| Folding and Stabilization of Native-Sequence-Reversed Proteins | Jun 16, 2016 | Protein DesignProtein Folding | —Unverified | 0 |
| A maximum-caliber approach to predicting perturbed folding kinetics due to mutations | May 25, 2016 | Protein Folding | —Unverified | 0 |
| Folding of Protein L with implications for collapse in the denatured state ensemble | Feb 29, 2016 | Protein Folding | —Unverified | 0 |
| Protein residue networks from a local search perspective | Nov 30, 2015 | DiversityProtein Folding | —Unverified | 0 |
| Bloch spin waves and emergent structure in protein folding with HIV envelope glycoprotein as an example | Nov 23, 2015 | Protein Folding | —Unverified | 0 |
| Chaos of Protein Folding | Oct 31, 2015 | Protein Folding | —Unverified | 0 |
| The short-cut network within protein residue networks | Aug 12, 2015 | Protein Folding | —Unverified | 0 |
| Solvent Effects in the Helix-Coil Transition Model can explain the Unusual Biophysics of Intrinsically Disordered Proteins | Jul 14, 2015 | Protein FoldingSpecificity | —Unverified | 0 |
| Structural Learning for Template-free Protein Folding | Nov 6, 2013 | Protein Folding | —Unverified | 0 |
| Deep Spatio-Temporal Architectures and Learning for Protein Structure Prediction | Dec 1, 2012 | BIG-bench Machine LearningPrediction | —Unverified | 0 |