SOTAVerified

Protein Design

Formally, given the design requirements of users, models are required to generate protein amino acid sequences that align with those requirements.

Papers

Showing 111120 of 175 papers

TitleStatusHype
Gradient-Informed Quality Diversity for the Illumination of Discrete Spaces0
Ideal gas behavior of rotamerically defined conformers in native globular proteins0
Implicitly Guided Design with PropEn: Match your Data to Follow the Gradient0
Improving Protein Sequence Design through Designability Preference Optimization0
Iterative Importance Fine-tuning of Diffusion Models0
Lattice protein design using Bayesian learning0
Learning immune receptor representations with protein language models0
Leveraging Deep Generative Model For Computational Protein Design And Optimization0
CCPL: Cross-modal Contrastive Protein Learning0
ProteinWeaver: A Divide-and-Assembly Approach for Protein Backbone Design0
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Benchmark Results

#ModelMetricClaimedVerifiedStatus
1GraphTransPerplexity6.63Unverified
2StructGNNPerplexity6.4Unverified
3AlphaDesignPerplexity6.3Unverified
4GCAPerplexity6.05Unverified
5GVPPerplexity5.36Unverified
6ProteinMPNNPerplexity4.61Unverified
7PiFoldPerplexity4.55Unverified
8Knowledge-DesignPerplexity3.46Unverified
#ModelMetricClaimedVerifiedStatus
1ESM-IFPerplexity6.44Unverified
2GVP-largePerplexity6.17Unverified