3D-MolT5: Leveraging Discrete Structural Information for Molecule-Text Modeling Jun 9, 2024 Molecular Property Prediction Molecule Captioning
Code Code Available 1HAC-Net: A Hybrid Attention-Based Convolutional Neural Network for Highly Accurate Protein-Ligand Binding Affinity Prediction Dec 23, 2022 Drug Discovery Property Prediction
Code Code Available 1Hierarchical Grammar-Induced Geometry for Data-Efficient Molecular Property Prediction Sep 4, 2023 Drug Discovery Molecular Property Prediction
Code Code Available 1Any-Property-Conditional Molecule Generation with Self-Criticism using Spanning Trees Jul 12, 2024 Graph Generation Property Prediction
Code Code Available 1Global Concept Explanations for Graphs by Contrastive Learning Apr 25, 2024 Contrastive Learning Fairness
Code Code Available 1GEOM: Energy-annotated molecular conformations for property prediction and molecular generation Jun 9, 2020 Property Prediction Transfer Learning
Code Code Available 1Generalization and Robustness Implications in Object-Centric Learning Jul 1, 2021 Inductive Bias Object
Code Code Available 1Geometric Transformer for End-to-End Molecule Properties Prediction Oct 26, 2021 Property Prediction
Code Code Available 1GPS++: An Optimised Hybrid MPNN/Transformer for Molecular Property Prediction Nov 18, 2022 Denoising Molecular Property Prediction
Code Code Available 1Improving Self-supervised Molecular Representation Learning using Persistent Homology Nov 29, 2023 Molecular Property Prediction molecular representation
Code Code Available 1Artificial Intelligence in Drug Discovery: Applications and Techniques Jun 9, 2021 Drug Design Drug Discovery
Code Code Available 1ADMET property prediction through combinations of molecular fingerprints Sep 29, 2023 Graph Neural Network Prediction
Code Code Available 1From Molecules to Materials: Pre-training Large Generalizable Models for Atomic Property Prediction Oct 25, 2023 Property Prediction
Code Code Available 1Fragment-based Pretraining and Finetuning on Molecular Graphs Oct 5, 2023 Contrastive Learning Property Prediction
Code Code Available 1Multi-channel learning for integrating structural hierarchies into context-dependent molecular representation Nov 5, 2023 Drug Discovery Molecular Property Prediction
Code Code Available 1GStarX: Explaining Graph Neural Networks with Structure-Aware Cooperative Games Jan 28, 2022 Attribute Feature Importance
Code Code Available 1ChemBERTa: Large-Scale Self-Supervised Pretraining for Molecular Property Prediction Oct 19, 2020 Molecular Property Prediction molecular representation
Code Code Available 1Fast Quantum Property Prediction via Deeper 2D and 3D Graph Networks Jun 16, 2021 Graph Neural Network Molecular Property Prediction
Code Code Available 1FunQG: Molecular Representation Learning Via Quotient Graphs Jul 18, 2022 Molecular Property Prediction molecular representation
Code Code Available 1GPS++: Reviving the Art of Message Passing for Molecular Property Prediction Feb 6, 2023 Molecular Property Prediction Property Prediction
Code Code Available 1E(n) Equivariant Topological Neural Networks May 24, 2024 Inductive Bias Molecular Property Prediction
Code Code Available 1AugLiChem: Data Augmentation Library of Chemical Structures for Machine Learning Nov 30, 2021 BIG-bench Machine Learning Data Augmentation
Code Code Available 1A community-powered search of machine learning strategy space to find NMR property prediction models Aug 13, 2020 BIG-bench Machine Learning Molecular Property Prediction
Code Code Available 1Directed Graph Grammars for Sequence-based Learning May 29, 2025 Bayesian Optimization Graph Generation
Code Code Available 1Enhancing Activity Prediction Models in Drug Discovery with the Ability to Understand Human Language Mar 6, 2023 Activity Prediction Attribute
Code Code Available 1DenseGNN: universal and scalable deeper graph neural networks for high-performance property prediction in crystals and molecules Jan 5, 2025 Domain Adaptation Property Prediction
Code Code Available 1Dual-view Molecule Pre-training Jun 17, 2021 Molecular Property Prediction Property Prediction
Code Code Available 1Dynamic In-context Learning with Conversational Models for Data Extraction and Materials Property Prediction May 16, 2024 In-Context Learning Property Prediction
Code Code Available 13D Infomax improves GNNs for Molecular Property Prediction Oct 8, 2021 Contrastive Learning Graph Learning
Code Code Available 1Automated 3D Pre-Training for Molecular Property Prediction Jun 13, 2023 Drug Discovery Graph Learning
Code Code Available 1AutoMat: Enabling Automated Crystal Structure Reconstruction from Microscopy via Agentic Tool Use May 19, 2025 Denoising Formation Energy
Code Code Available 1Explaining Deep Graph Networks with Molecular Counterfactuals Nov 9, 2020 counterfactual Prediction
Code Code Available 1Few-Shot Graph Learning for Molecular Property Prediction Feb 16, 2021 Attribute Drug Discovery
Code Code Available 1Foundation Molecular Grammar: Multi-Modal Foundation Models Induce Interpretable Molecular Graph Languages May 29, 2025 Diversity Prompt Learning
Code Code Available 1Bayesian Graph Neural Networks for Molecular Property Prediction Nov 25, 2020 Molecular Property Prediction Prediction
Code Code Available 1FragNet: A Graph Neural Network for Molecular Property Prediction with Four Levels of Interpretability Oct 16, 2024 Drug Discovery Graph Neural Network
Code Code Available 1A graph representation of molecular ensembles for polymer property prediction May 17, 2022 BIG-bench Machine Learning Graph Neural Network
Code Code Available 1Deep learning-based denoising for fast time-resolved flame emission spectroscopy in high-pressure combustion environment Jul 29, 2022 Denoising Property Prediction
Code Code Available 1A Molecular Multimodal Foundation Model Associating Molecule Graphs with Natural Language Sep 12, 2022 Contrastive Learning Cross-Modal Retrieval
Code Code Available 1Generative Pre-Training from Molecules Sep 16, 2021 Feature Engineering General Knowledge
Code Code Available 1GeomGCL: Geometric Graph Contrastive Learning for Molecular Property Prediction Sep 24, 2021 Contrastive Learning Data Augmentation
Code Code Available 1GIMLET: A Unified Graph-Text Model for Instruction-Based Molecule Zero-Shot Learning May 28, 2023 Property Prediction Zero-Shot Learning
Code Code Available 1An algorithmic framework for synthetic cost-aware decision making in molecular design Nov 3, 2023 Decision Making Property Prediction
Code Code Available 1CACTUS: Chemistry Agent Connecting Tool-Usage to Science May 2, 2024 Molecular Property Prediction Prompt Engineering
Code Code Available 1DGL-LifeSci: An Open-Source Toolkit for Deep Learning on Graphs in Life Science Jun 27, 2021 Deep Learning Molecular Property Prediction
Code Code Available 1Can Large Language Models Empower Molecular Property Prediction? Jul 14, 2023 Molecular Property Prediction Prediction
Code Code Available 1CHILI: Chemically-Informed Large-scale Inorganic Nanomaterials Dataset for Advancing Graph Machine Learning Feb 20, 2024 Atomic number classification Benchmarking
Code Code Available 1Graph Neural Networks Need Cluster-Normalize-Activate Modules Dec 5, 2024 Node Classification Property Prediction
Code Code Available 1Graph Sampling-based Meta-Learning for Molecular Property Prediction Jun 29, 2023 Graph Sampling Meta-Learning
Code Code Available 13DReact: Geometric deep learning for chemical reactions Dec 13, 2023 Deep Learning Property Prediction
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