| 3D TransUNet: Advancing Medical Image Segmentation through Vision Transformers | Oct 11, 2023 | DecoderImage Segmentation | CodeCode Available | 4 | 5 |
| Universal and Extensible Language-Vision Models for Organ Segmentation and Tumor Detection from Abdominal Computed Tomography | May 28, 2024 | Computational EfficiencyComputed Tomography (CT) | CodeCode Available | 4 | 5 |
| UNETR: Transformers for 3D Medical Image Segmentation | Mar 18, 2021 | 3D Medical Imaging SegmentationDecoder | CodeCode Available | 3 | 5 |
| A-Eval: A Benchmark for Cross-Dataset Evaluation of Abdominal Multi-Organ Segmentation | Sep 7, 2023 | Organ SegmentationSegmentation | CodeCode Available | 2 | 5 |
| BRAU-Net++: U-Shaped Hybrid CNN-Transformer Network for Medical Image Segmentation | Jan 1, 2024 | DecoderImage Segmentation | CodeCode Available | 2 | 5 |
| Unleashing the Potential of SAM for Medical Adaptation via Hierarchical Decoding | Mar 27, 2024 | DecoderImage Segmentation | CodeCode Available | 2 | 5 |
| Disruptive Autoencoders: Leveraging Low-level features for 3D Medical Image Pre-training | Jul 31, 2023 | Organ SegmentationRepresentation Learning | CodeCode Available | 2 | 5 |
| CLIP-Driven Universal Model for Organ Segmentation and Tumor Detection | Jan 2, 2023 | Organ SegmentationSegmentation | CodeCode Available | 2 | 5 |
| MCANet: Medical Image Segmentation with Multi-Scale Cross-Axis Attention | Dec 14, 2023 | Image SegmentationLesion Segmentation | CodeCode Available | 2 | 5 |
| U-Mamba: Enhancing Long-range Dependency for Biomedical Image Segmentation | Jan 9, 2024 | Cell SegmentationImage Segmentation | CodeCode Available | 2 | 5 |
| Rethinking Abdominal Organ Segmentation (RAOS) in the clinical scenario: A robustness evaluation benchmark with challenging cases | Jun 19, 2024 | 8kHallucination | CodeCode Available | 2 | 5 |
| TransUNet: Transformers Make Strong Encoders for Medical Image Segmentation | Feb 8, 2021 | Cardiac SegmentationDecoder | CodeCode Available | 2 | 5 |
| AbdomenAtlas-8K: Annotating 8,000 CT Volumes for Multi-Organ Segmentation in Three Weeks | May 16, 2023 | 8kActive Learning | CodeCode Available | 2 | 5 |
| TotalVibeSegmentator: Full Body MRI Segmentation for the NAKO and UK Biobank | May 31, 2024 | EpidemiologyHoldout Set | CodeCode Available | 2 | 5 |
| Test-Time Adaptation with SaLIP: A Cascade of SAM and CLIP for Zero shot Medical Image Segmentation | Apr 9, 2024 | Image SegmentationMedical Image Segmentation | CodeCode Available | 2 | 5 |
| Customized Segment Anything Model for Medical Image Segmentation | Apr 26, 2023 | DecoderImage Segmentation | CodeCode Available | 2 | 5 |
| MRSegmentator: Multi-Modality Segmentation of 40 Classes in MRI and CT | May 10, 2024 | Model OptimizationOrgan Segmentation | CodeCode Available | 2 | 5 |
| Self Pre-training with Masked Autoencoders for Medical Image Classification and Segmentation | Mar 10, 2022 | Brain Tumor Segmentationimage-classification | CodeCode Available | 1 | 5 |
| D-Net: Dynamic Large Kernel with Dynamic Feature Fusion for Volumetric Medical Image Segmentation | Mar 15, 2024 | Brain Tumor SegmentationImage Segmentation | CodeCode Available | 1 | 5 |
| Self-supervised 3D anatomy segmentation using self-distilled masked image transformer (SMIT) | May 20, 2022 | AnatomyImage Segmentation | CodeCode Available | 1 | 5 |
| PSIGAN: Joint probabilistic segmentation and image distribution matching for unpaired cross-modality adaptation based MRI segmentation | Jul 18, 2020 | Domain AdaptationGenerative Adversarial Network | CodeCode Available | 1 | 5 |
| Abdominal organ segmentation via deep diffeomorphic mesh deformations | Jun 27, 2023 | Organ SegmentationSegmentation | CodeCode Available | 1 | 5 |
| Efficient Context-Aware Network for Abdominal Multi-organ Segmentation | Sep 22, 2021 | DecoderOrgan Segmentation | CodeCode Available | 1 | 5 |
| Multi-organ Segmentation over Partially Labeled Datasets with Multi-scale Feature Abstraction | Jan 1, 2020 | Image SegmentationOrgan Segmentation | CodeCode Available | 1 | 5 |
| PCRLv2: A Unified Visual Information Preservation Framework for Self-supervised Pre-training in Medical Image Analysis | Jan 2, 2023 | Brain Tumor SegmentationMedical Image Analysis | CodeCode Available | 1 | 5 |
| PG-SAM: Prior-Guided SAM with Medical for Multi-organ Segmentation | Mar 23, 2025 | Image SegmentationMedical Image Segmentation | CodeCode Available | 1 | 5 |
| 3D U^2-Net: A 3D Universal U-Net for Multi-Domain Medical Image Segmentation | Sep 4, 2019 | image-classificationImage Classification | CodeCode Available | 1 | 5 |
| DLUNet: Semi-supervised Learning based Dual-Light UNet for Multi-organ Segmentation | Sep 22, 2022 | GPUOrgan Segmentation | CodeCode Available | 1 | 5 |
| DoDNet: Learning to segment multi-organ and tumors from multiple partially labeled datasets | Nov 20, 2020 | Image SegmentationMedical Image Segmentation | CodeCode Available | 1 | 5 |
| A Location-Sensitive Local Prototype Network for Few-Shot Medical Image Segmentation | Mar 18, 2021 | Image SegmentationMedical Image Segmentation | CodeCode Available | 1 | 5 |
| Self-supervised Semantic Segmentation: Consistency over Transformation | Aug 31, 2023 | Image SegmentationMedical Image Segmentation | CodeCode Available | 1 | 5 |
| CoTr: Efficiently Bridging CNN and Transformer for 3D Medical Image Segmentation | Mar 4, 2021 | Image SegmentationInductive Bias | CodeCode Available | 1 | 5 |
| AbdomenCT-1K: Is Abdominal Organ Segmentation A Solved Problem? | Oct 28, 2020 | Continual LearningOrgan Segmentation | CodeCode Available | 1 | 5 |
| MA-SAM: Modality-agnostic SAM Adaptation for 3D Medical Image Segmentation | Sep 16, 2023 | Image SegmentationMedical Image Segmentation | CodeCode Available | 1 | 5 |
| CRISP-SAM2: SAM2 with Cross-Modal Interaction and Semantic Prompting for Multi-Organ Segmentation | Jun 29, 2025 | Organ Segmentation | CodeCode Available | 1 | 5 |
| Anomaly Detection-Inspired Few-Shot Medical Image Segmentation Through Self-Supervision With Supervoxels | Mar 3, 2022 | Anomaly DetectionCardiac Segmentation | CodeCode Available | 1 | 5 |
| MagicNet: Semi-Supervised Multi-Organ Segmentation via Magic-Cube Partition and Recovery | Dec 29, 2022 | AnatomyData Augmentation | CodeCode Available | 1 | 5 |
| Learnable Weight Initialization for Volumetric Medical Image Segmentation | Jun 15, 2023 | Image SegmentationMedical Image Segmentation | CodeCode Available | 1 | 5 |
| Image to Images Translation for Multi-Task Organ Segmentation and Bone Suppression in Chest X-Ray Radiography | Jun 24, 2019 | Decision MakingGenerative Adversarial Network | CodeCode Available | 1 | 5 |
| Leveraging Textual Anatomical Knowledge for Class-Imbalanced Semi-Supervised Multi-Organ Segmentation | Jan 23, 2025 | Contrastive LearningOrgan Segmentation | CodeCode Available | 1 | 5 |
| Concurrent Spatial and Channel Squeeze & Excitation in Fully Convolutional Networks | Mar 7, 2018 | Brain Segmentationimage-classification | CodeCode Available | 1 | 5 |
| Combining Self-Training and Hybrid Architecture for Semi-supervised Abdominal Organ Segmentation | Jul 23, 2022 | CPUGPU | CodeCode Available | 1 | 5 |
| Uncertainty-based graph convolutional networks for organ segmentation refinement | Jun 5, 2019 | Graph LearningOrgan Segmentation | CodeCode Available | 1 | 5 |
| An Uncertainty-Driven GCN Refinement Strategy for Organ Segmentation | Dec 6, 2020 | Graph LearningOrgan Segmentation | CodeCode Available | 1 | 5 |
| Boundary-Aware Network for Abdominal Multi-Organ Segmentation | Aug 29, 2022 | DecoderImage Segmentation | CodeCode Available | 1 | 5 |
| Continual Learning for Abdominal Multi-Organ and Tumor Segmentation | Jun 1, 2023 | Continual LearningOrgan Segmentation | CodeCode Available | 1 | 5 |
| CENet: Context Enhancement Network for Medical Image Segmentation | May 23, 2025 | DecoderImage Segmentation | CodeCode Available | 1 | 5 |
| LLM-driven Multimodal Target Volume Contouring in Radiation Oncology | Nov 3, 2023 | Organ Segmentation | CodeCode Available | 1 | 5 |
| Federated Multi-organ Segmentation with Inconsistent Labels | Jun 14, 2022 | DecoderFederated Learning | CodeCode Available | 1 | 5 |
| FocusNetv2: Imbalanced Large and Small Organ Segmentation with Adversarial Shape Constraint for Head and Neck CT Images | Apr 5, 2021 | Organ SegmentationSegmentation | CodeCode Available | 1 | 5 |
