| BrainGB: A Benchmark for Brain Network Analysis with Graph Neural Networks | Mar 17, 2022 | Functional Connectivity | CodeCode Available | 2 | 5 |
| Modular Boundaries in Recurrent Neural Networks | Oct 31, 2023 | Community DetectionDimensionality Reduction | CodeCode Available | 2 | 5 |
| MHNet: Multi-view High-order Network for Diagnosing Neurodevelopmental Disorders Using Resting-state fMRI | Jul 3, 2024 | Functional ConnectivityGraph Neural Network | CodeCode Available | 2 | 5 |
| An Explainable Geometric-Weighted Graph Attention Network for Identifying Functional Networks Associated with Gait Impairment | Jul 24, 2023 | Functional ConnectivityGraph Attention | CodeCode Available | 1 | 5 |
| Learning Dynamic Graph Representation of Brain Connectome with Spatio-Temporal Attention | May 27, 2021 | Functional Connectivity | CodeCode Available | 1 | 5 |
| Improving Phenotype Prediction using Long-Range Spatio-Temporal Dynamics of Functional Connectivity | Sep 7, 2021 | Action RecognitionFunctional Connectivity | CodeCode Available | 1 | 5 |
| From Connectomic to Task-evoked Fingerprints: Individualized Prediction of Task Contrasts from Resting-state Functional Connectivity | Aug 7, 2020 | BIG-bench Machine LearningFunctional Connectivity | CodeCode Available | 1 | 5 |
| Fader Networks for domain adaptation on fMRI: ABIDE-II study | Oct 14, 2020 | Domain AdaptationFunctional Connectivity | CodeCode Available | 1 | 5 |
| Data-Driven Network Neuroscience: On Data Collection and Benchmark | Nov 11, 2022 | Functional Connectivity | CodeCode Available | 1 | 5 |
| Spatio-Temporal Graph Convolution for Resting-State fMRI Analysis | Mar 24, 2020 | Functional ConnectivityTime Series | CodeCode Available | 1 | 5 |
| Investigating Brain Connectivity with Graph Neural Networks and GNNExplainer | Jun 4, 2022 | EEGElectroencephalogram (EEG) | CodeCode Available | 1 | 5 |
| HappyFeat -- An interactive and efficient BCI framework for clinical applications | Oct 4, 2023 | Brain Computer Interfacefeature selection | CodeCode Available | 1 | 5 |
| Multi-View Spatial-Temporal Graph Convolutional Networks with Domain Generalization for Sleep Stage Classification | Sep 4, 2021 | ClassificationDomain Generalization | CodeCode Available | 1 | 5 |
| From Connectomic to Task-evoked Fingerprints: Individualized Prediction of Task Contrasts fromResting-state Functional Connectivity | Aug 7, 2020 | BIG-bench Machine LearningFunctional Connectivity | CodeCode Available | 1 | 5 |
| Functional connectivity ensemble method to enhance BCI performance (FUCONE) | Nov 4, 2021 | Brain Computer InterfaceDiversity | CodeCode Available | 1 | 5 |
| Motion Correction and Volumetric Reconstruction for Fetal Functional Magnetic Resonance Imaging Data | Feb 11, 2022 | Functional ConnectivityL2 Regularization | CodeCode Available | 1 | 5 |
| CI-GNN: A Granger Causality-Inspired Graph Neural Network for Interpretable Brain Network-Based Psychiatric Diagnosis | Jan 4, 2023 | Functional ConnectivityGraph Neural Network | CodeCode Available | 1 | 5 |
| Understanding Graph Isomorphism Network for rs-fMRI Functional Connectivity Analysis | Jan 10, 2020 | Functional ConnectivityGeneral Classification | CodeCode Available | 1 | 5 |
| BrainIB: Interpretable Brain Network-based Psychiatric Diagnosis with Graph Information Bottleneck | May 7, 2022 | DiagnosticFunctional Connectivity | CodeCode Available | 1 | 5 |
| Contrastive Graph Learning for Population-based fMRI Classification | Mar 26, 2022 | ClassificationFunctional Connectivity | CodeCode Available | 1 | 5 |
| EEG-GCNN: Augmenting Electroencephalogram-based Neurological Disease Diagnosis using a Domain-guided Graph Convolutional Neural Network | Nov 17, 2020 | EEGElectroencephalogram (EEG) | CodeCode Available | 1 | 5 |
| Statistical Perspective on Functional and Causal Neural Connectomics: The Time-Aware PC Algorithm | Apr 11, 2022 | Causal Inferencecounterfactual | CodeCode Available | 1 | 5 |
| Analyzing Dynamical Brain Functional Connectivity As Trajectories on Space of Covariance Matrices | Apr 10, 2019 | ClusteringDimensionality Reduction | CodeCode Available | 0 | 5 |
| Graph Contrastive Learning for Connectome Classification | Feb 7, 2025 | ClassificationContrastive Learning | CodeCode Available | 0 | 5 |
| Identifiability in Functional Connectivity May Unintentionally Inflate Prediction Results | Aug 2, 2023 | Functional Connectivity | CodeCode Available | 0 | 5 |
| A mathematical perspective on edge-centric brain functional connectivity | Jun 20, 2021 | Functional ConnectivityTime Series | CodeCode Available | 0 | 5 |
| A deep learning model for data-driven discovery of functional connectivity | Dec 7, 2021 | Functional Connectivity | CodeCode Available | 0 | 5 |
| Abnormal Functional Brain Network Connectivity Associated with Alzheimer's Disease | May 16, 2023 | Functional Connectivity | CodeCode Available | 0 | 5 |
| Feature interpretability in BCIs: exploring the role of network lateralization | Jul 16, 2024 | BenchmarkingEEG | CodeCode Available | 0 | 5 |
| A Deep Probabilistic Spatiotemporal Framework for Dynamic Graph Representation Learning with Application to Brain Disorder Identification | Feb 14, 2023 | Functional ConnectivityGraph Embedding | CodeCode Available | 0 | 5 |
| Evaluating the evolution and inter-individual variability of infant functional module development from 0 to 5 years old | Jul 18, 2024 | Functional Connectivity | CodeCode Available | 0 | 5 |
| A Constrained, Weighted-L1 Minimization Approach for Joint Discovery of Heterogeneous Neural Connectivity Graphs | Sep 13, 2017 | Connectivity EstimationFunctional Connectivity | CodeCode Available | 0 | 5 |
| Extracting the Multiscale Causal Backbone of Brain Dynamics | Oct 31, 2023 | Functional Connectivity | CodeCode Available | 0 | 5 |
| ImageNomer: description of a functional connectivity and omics analysis tool and case study identifying a race confound | Feb 1, 2023 | Data VisualizationFunctional Connectivity | CodeCode Available | 0 | 5 |
| Dynamic Functional Connectivity | Jan 9, 2023 | ClusteringFunctional Connectivity | CodeCode Available | 0 | 5 |
| Differential Covariance: A New Class of Methods to Estimate Sparse Connectivity from Neural Recordings | Jun 8, 2017 | Connectivity EstimationFunctional Connectivity | CodeCode Available | 0 | 5 |
| EAG-RS: A Novel Explainability-guided ROI-Selection Framework for ASD Diagnosis via Inter-regional Relation Learning | Oct 5, 2023 | Explainable artificial intelligenceFunctional Connectivity | CodeCode Available | 0 | 5 |
| Correlation-Distance Graph Learning for Treatment Response Prediction from rs-fMRI | Nov 17, 2023 | Functional ConnectivityGraph Learning | CodeCode Available | 0 | 5 |
| RIGOLETTO -- RIemannian GeOmetry LEarning: applicaTion To cOnnectivity. A contribution to the Clinical BCI Challenge -- WCCI2020 | Feb 9, 2021 | EEGElectroencephalogram (EEG) | CodeCode Available | 0 | 5 |
| Foundation-Model-Boosted Multimodal Learning for fMRI-based Neuropathic Pain Drug Response Prediction | Feb 28, 2025 | Drug Response PredictionFunctional Connectivity | CodeCode Available | 0 | 5 |
| Connectivity-Inspired Network for Context-Aware Recognition | Sep 6, 2024 | Biologically-plausible TrainingCausal Discovery | CodeCode Available | 0 | 5 |
| DynDepNet: Learning Time-Varying Dependency Structures from fMRI Data via Dynamic Graph Structure Learning | Sep 27, 2022 | Functional ConnectivityGraph structure learning | CodeCode Available | 0 | 5 |
| Deriving Autism Spectrum Disorder Functional Networks from RS-FMRI Data using Group ICA and Dictionary Learning | Jun 7, 2021 | Dictionary LearningFunctional Connectivity | CodeCode Available | 0 | 5 |
| Detecting Anatomical and Functional Connectivity Relations in Biomedical Literature via Language Representation Models | Jun 1, 2021 | Active LearningFunctional Connectivity | CodeCode Available | 0 | 5 |
| A Sparsity Inducing Nuclear-Norm Estimator (SpINNEr) for Matrix-Variate Regression in Brain Connectivity Analysis | Jan 30, 2020 | Functional Connectivityregression | CodeCode Available | 0 | 5 |
| Discovering Dynamic Functional Brain Networks via Spatial and Channel-wise Attention | May 19, 2022 | Functional Connectivity | CodeCode Available | 0 | 5 |
| Causal inference of brain connectivity from fMRI with ψ-Learning Incorporated Linear non-Gaussian Acyclic Model (ψ-LiNGAM) | Jun 16, 2020 | Causal InferenceFunctional Connectivity | CodeCode Available | 0 | 5 |
| Brain Network Construction and Classification Toolbox (BrainNetClass) | Jun 17, 2019 | ClassificationFunctional Connectivity | CodeCode Available | 0 | 5 |
| Change Detection in Graph Streams by Learning Graph Embeddings on Constant-Curvature Manifolds | May 16, 2018 | Change DetectionFunctional Connectivity | CodeCode Available | 0 | 5 |
| A Bayesian incorporated linear non-Gaussian acyclic model for multiple directed graph estimation to study brain emotion circuit development in adolescence | Jun 16, 2020 | Functional Connectivity | CodeCode Available | 0 | 5 |