| ELECTRAMed: a new pre-trained language representation model for biomedical NLP | Apr 19, 2021 | Drug–drug Interaction ExtractionLanguage Modeling | CodeCode Available | 1 | 5 |
| Using Drug Descriptions and Molecular Structures for Drug-Drug Interaction Extraction from Literature | Oct 24, 2020 | Drug–drug Interaction Extraction | CodeCode Available | 1 | 5 |
| CharacterBERT: Reconciling ELMo and BERT for Word-Level Open-Vocabulary Representations From Characters | Oct 20, 2020 | Clinical Concept ExtractionDrug–drug Interaction Extraction | CodeCode Available | 1 | 5 |
| A Dataset for N-ary Relation Extraction of Drug Combinations | May 4, 2022 | Drug–drug Interaction ExtractionRelation | CodeCode Available | 1 | 5 |
| BioBERT: a pre-trained biomedical language representation model for biomedical text mining | Jan 25, 2019 | Drug–drug Interaction ExtractionFew-Shot Learning | CodeCode Available | 1 | 5 |
| SciFive: a text-to-text transformer model for biomedical literature | May 28, 2021 | Document ClassificationDrug–drug Interaction Extraction | CodeCode Available | 1 | 5 |
| SSI–DDI: Substructure–Substructure Interactions for Drug–Drug Interaction Prediction | Nov 7, 2021 | Drug–drug Interaction Extractionmolecular representation | CodeCode Available | 1 | 5 |
| EGFI: Drug-Drug Interaction Extraction and Generation with Fusion of Enriched Entity and Sentence Information | Jan 25, 2021 | ClassificationDrug–drug Interaction Extraction | CodeCode Available | 1 | 5 |
| Transfer Learning in Biomedical Natural Language Processing: An Evaluation of BERT and ELMo on Ten Benchmarking Datasets | Jun 13, 2019 | BenchmarkingDocument Classification | CodeCode Available | 1 | 5 |
| Domain-Specific Language Model Pretraining for Biomedical Natural Language Processing | Jul 31, 2020 | Continual Pretraining | CodeCode Available | 0 | 5 |
| Drug-Drug Interaction Extraction from Biomedical Text Using Long Short Term Memory Network | Jan 28, 2017 | Drug–drug Interaction ExtractionFeature Engineering | CodeCode Available | 0 | 5 |
| MocFormer: A Two-Stage Pre-training-Driven Transformer for Drug-Target Interactions Prediction | Oct 26, 2023 | Drug–drug Interaction Extraction | CodeCode Available | 0 | 5 |
| End-to-End n-ary Relation Extraction for Combination Drug Therapies | Mar 29, 2023 | ArticlesDrug–drug Interaction Extraction | CodeCode Available | 0 | 5 |
| Drug-Drug Adverse Effect Prediction with Graph Co-Attention | May 2, 2019 | Drug–drug Interaction Extraction | CodeCode Available | 0 | 5 |
| WBI-DDI: Drug-Drug Interaction Extraction using Majority Voting | Jun 1, 2013 | Drug–drug Interaction Extraction | —Unverified | 0 | 0 |
| A graph kernel based on context vectors for extracting drug–drug interactions | Mar 21, 2016 | Drug–drug Interaction ExtractionSentence | —Unverified | 0 | 0 |
| CADGL: Context-Aware Deep Graph Learning for Predicting Drug-Drug Interactions | Mar 25, 2024 | DecoderDrug–drug Interaction Extraction | —Unverified | 0 | 0 |
| Drug-drug Interaction Extraction via Recurrent Neural Network with Multiple Attention Layers | May 9, 2017 | Deep LearningDrug–drug Interaction Extraction | —Unverified | 0 | 0 |
| Drug–drug interaction extraction via hierarchical RNNs on sequence and shortest dependency paths | Oct 25, 2017 | Drug–drug Interaction ExtractionPharmacovigilance | —Unverified | 0 | 0 |
| Enhancing Drug-Drug Interaction Extraction from Texts by Molecular Structure Information | May 15, 2018 | Drug–drug Interaction Extraction | —Unverified | 0 | 0 |
| Exploiting the Scope of Negations and Heterogeneous Features for Relation Extraction: A Case Study for Drug-Drug Interaction Extraction | Jun 1, 2013 | Drug–drug Interaction ExtractionNegation Detection | —Unverified | 0 | 0 |
| Extracting drug–drug interactions from literature using a rich feature-based linear kernel approach | Mar 19, 2015 | Drug–drug Interaction Extraction | —Unverified | 0 | 0 |
| Integrating Heterogeneous Domain Information into Relation Extraction: A Case Study on Drug-Drug Interaction Extraction | Dec 21, 2022 | Drug–drug Interaction ExtractionLink Prediction | —Unverified | 0 | 0 |
| MMRAG: Multi-Mode Retrieval-Augmented Generation with Large Language Models for Biomedical In-Context Learning | Feb 21, 2025 | DiversityDrug–drug Interaction Extraction | —Unverified | 0 | 0 |
| Syntax-aware Multi-task Graph Convolutional Networks for Biomedical Relation Extraction | Nov 1, 2019 | Dependency ParsingDrug–drug Interaction Extraction | —Unverified | 0 | 0 |
