| Quantum-Inspired Machine Learning for Molecular Docking | Jan 22, 2024 | Blind DockingCombinatorial Optimization | —Unverified | 0 |
| DeepRLI: A Multi-objective Framework for Universal Protein--Ligand Interaction Prediction | Jan 19, 2024 | Contrastive LearningDrug Design | CodeCode Available | 0 |
| Rigid Protein-Protein Docking via Equivariant Elliptic-Paraboloid Interface Prediction | Jan 17, 2024 | Drug Design | CodeCode Available | 0 |
| Binding-Adaptive Diffusion Models for Structure-Based Drug Design | Jan 15, 2024 | AvgDrug Design | CodeCode Available | 1 |
| Empirical Evidence for the Fragment level Understanding on Drug Molecular Structure of LLMs | Jan 15, 2024 | Drug DesignDrug Discovery | CodeCode Available | 0 |
| Deep Manifold Transformation for Protein Representation Learning | Jan 12, 2024 | Drug DesignRepresentation Learning | —Unverified | 0 |
| Hybrid quantum cycle generative adversarial network for small molecule generation | Dec 28, 2023 | DiversityDrug Design | —Unverified | 0 |
| Cellular forgetting, desensitisation, stress and aging in signalling networks. When do cells refuse to learn more? | Dec 28, 2023 | Change DetectionDrug Design | —Unverified | 0 |
| PlayMolecule Viewer: a toolkit for the visualization of molecules and other data | Dec 22, 2023 | Data VisualizationDrug Design | —Unverified | 0 |
| De novo Drug Design using Reinforcement Learning with Multiple GPT Agents | Dec 21, 2023 | DiversityDrug Design | CodeCode Available | 1 |
| CrossBind: Collaborative Cross-Modal Identification of Protein Nucleic-Acid-Binding Residues | Dec 19, 2023 | Contrastive LearningDrug Design | CodeCode Available | 0 |
| Automating reward function configuration for drug design | Dec 15, 2023 | Drug DesignDrug Discovery | —Unverified | 0 |
| NovoMol: Recurrent Neural Network for Orally Bioavailable Drug Design and Validation on PDGFRα Receptor | Dec 3, 2023 | Drug Design | CodeCode Available | 0 |
| From Byte to Bench to Bedside: Molecular Dynamics Simulations and Drug Discovery | Nov 28, 2023 | Drug DesignDrug Discovery | —Unverified | 0 |
| GlycoNMR: Dataset and benchmarks for NMR chemical shift prediction of carbohydrates with graph neural networks | Nov 28, 2023 | Drug Designmolecular representation | —Unverified | 0 |
| DiffBindFR: An SE(3) Equivariant Network for Flexible Protein-Ligand Docking | Nov 26, 2023 | Drug DesignMolecular Docking | CodeCode Available | 1 |
| Docking-based generative approaches in the search for new drug candidates | Nov 22, 2023 | Drug DesignMolecular Docking | —Unverified | 0 |
| Accelerating Inference in Molecular Diffusion Models with Latent Representations of Protein Structure | Nov 22, 2023 | Drug Design | CodeCode Available | 1 |
| Computational Explorations in Biomedicine: Unraveling Molecular Dynamics for Cancer, Drug Delivery, and Biomolecular Insights using LAMMPS Simulations | Nov 21, 2023 | Computational EfficiencyDrug Design | —Unverified | 0 |
| STRIDE: Structure-guided Generation for Inverse Design of Molecules | Nov 6, 2023 | Drug DesignDrug Discovery | —Unverified | 0 |
| Delta Score: Improving the Binding Assessment of Structure-Based Drug Design Methods | Nov 1, 2023 | Drug DesignDrug Discovery | —Unverified | 0 |
| Conformal Drug Property Prediction with Density Estimation under Covariate Shift | Oct 18, 2023 | Conformal PredictionDensity Estimation | —Unverified | 0 |
| Docking Peptides into HIV/FIV Protease with Deep Learning and Focused Peptide Docking Methods | Oct 14, 2023 | Drug DesignMolecular Docking | —Unverified | 0 |
| ProFSA: Self-supervised Pocket Pretraining via Protein Fragment-Surroundings Alignment | Oct 11, 2023 | Drug Design | CodeCode Available | 1 |
| PointGAT: A quantum chemical property prediction model integrating graph attention and 3D geometry | Oct 8, 2023 | 3D geometryComputational chemistry | —Unverified | 0 |