| SynFlowNet: Design of Diverse and Novel Molecules with Synthesis Constraints | May 2, 2024 | DiversityDrug Design | CodeCode Available | 2 |
| Optimized Drug Design using Multi-Objective Evolutionary Algorithms with SELFIES | May 1, 2024 | Drug DesignEvolutionary Algorithms | —Unverified | 0 |
| Leveraging Active Subspaces to Capture Epistemic Model Uncertainty in Deep Generative Models for Molecular Design | Apr 30, 2024 | Bayesian InferenceDiversity | —Unverified | 0 |
| Deep Lead Optimization: Leveraging Generative AI for Structural Modification | Apr 30, 2024 | Drug Design | —Unverified | 0 |
| Mamba-360: Survey of State Space Models as Transformer Alternative for Long Sequence Modelling: Methods, Applications, and Challenges | Apr 24, 2024 | Drug DesignInductive Bias | CodeCode Available | 2 |
| ControlMol: Adding Substructure Control To Molecule Diffusion Models | Apr 22, 2024 | 3D Molecule GenerationDrug Design | —Unverified | 0 |
| Protein language models are performant in structure-free virtual screening | Apr 20, 2024 | Drug DesignMolecular Docking | CodeCode Available | 1 |
| MolCRAFT: Structure-Based Drug Design in Continuous Parameter Space | Apr 18, 2024 | Drug Design | CodeCode Available | 2 |
| Multi-objective generative AI for designing novel brain-targeting small molecules | Apr 16, 2024 | Drug DesignGraph Neural Network | —Unverified | 0 |
| AUTODIFF: Autoregressive Diffusion Modeling for Structure-based Drug Design | Apr 2, 2024 | Drug DesignDrug Discovery | —Unverified | 0 |
| AlphaFold2 for protein structure prediction: Best practices and critical analyses | Mar 19, 2024 | Drug DesignProtein Structure Prediction | —Unverified | 0 |
| DecompOpt: Controllable and Decomposed Diffusion Models for Structure-based Molecular Optimization | Mar 7, 2024 | Drug DesignDrug Discovery | —Unverified | 0 |
| Stabilizing Policy Gradients for Stochastic Differential Equations via Consistency with Perturbation Process | Mar 7, 2024 | Drug DesignPolicy Gradient Methods | —Unverified | 0 |
| PPFlow: Target-aware Peptide Design with Torsional Flow Matching | Mar 5, 2024 | Drug DesignDrug Discovery | CodeCode Available | 2 |
| DeepBioisostere: Discovering Bioisosteres with Deep Learning for a Fine Control of Multiple Molecular Properties | Mar 5, 2024 | Drug Design | —Unverified | 0 |
| Rethinking Specificity in SBDD: Leveraging Delta Score and Energy-Guided Diffusion | Mar 4, 2024 | Contrastive LearningDrug Design | —Unverified | 0 |
| Exploring Gene Regulatory Interaction Networks and predicting therapeutic molecules for Hypopharyngeal Cancer and EGFR-mutated lung adenocarcinoma | Feb 27, 2024 | Drug Design | —Unverified | 0 |
| DecompDiff: Diffusion Models with Decomposed Priors for Structure-Based Drug Design | Feb 26, 2024 | AvgDrug Design | CodeCode Available | 2 |
| Graph Diffusion Policy Optimization | Feb 26, 2024 | Drug DesignGraph Generation | CodeCode Available | 1 |
| Structure-Based Drug Design via 3D Molecular Generative Pre-training and Sampling | Feb 22, 2024 | Drug DesignMolecular Docking | —Unverified | 0 |
| Re-Dock: Towards Flexible and Realistic Molecular Docking with Diffusion Bridge | Feb 18, 2024 | Drug DesignMolecular Docking | —Unverified | 0 |
| A Survey of Generative AI for de novo Drug Design: New Frontiers in Molecule and Protein Generation | Feb 13, 2024 | Drug Design | CodeCode Available | 2 |
| Learning big logical rules by joining small rules | Jan 29, 2024 | Drug DesignInductive logic programming | CodeCode Available | 0 |
| Endowing Protein Language Models with Structural Knowledge | Jan 26, 2024 | Drug DesignLanguage Modeling | CodeCode Available | 1 |
| Navigating the Maize: Cyclic and conditional computational graphs for molecular simulation | Jan 22, 2024 | Active LearningComputational chemistry | —Unverified | 0 |