| Computational Explorations in Biomedicine: Unraveling Molecular Dynamics for Cancer, Drug Delivery, and Biomolecular Insights using LAMMPS Simulations | Nov 21, 2023 | Computational EfficiencyDrug Design | —Unverified | 0 |
| STRIDE: Structure-guided Generation for Inverse Design of Molecules | Nov 6, 2023 | Drug DesignDrug Discovery | —Unverified | 0 |
| Delta Score: Improving the Binding Assessment of Structure-Based Drug Design Methods | Nov 1, 2023 | Drug DesignDrug Discovery | —Unverified | 0 |
| Conformal Drug Property Prediction with Density Estimation under Covariate Shift | Oct 18, 2023 | Conformal PredictionDensity Estimation | —Unverified | 0 |
| Docking Peptides into HIV/FIV Protease with Deep Learning and Focused Peptide Docking Methods | Oct 14, 2023 | Drug DesignMolecular Docking | —Unverified | 0 |
| PointGAT: A quantum chemical property prediction model integrating graph attention and 3D geometry | Oct 8, 2023 | 3D geometryComputational chemistry | —Unverified | 0 |
| Diffusing on Two Levels and Optimizing for Multiple Properties: A Novel Approach to Generating Molecules with Desirable Properties | Oct 5, 2023 | Drug Design | —Unverified | 0 |
| De Novo Drug Design with Joint Transformers | Oct 3, 2023 | DecoderDrug Design | —Unverified | 0 |
| A Comprehensive Review of Generative AI in Healthcare | Oct 1, 2023 | DiagnosticDrug Design | —Unverified | 0 |
| Language models in molecular discovery | Sep 28, 2023 | ChatbotComputational chemistry | —Unverified | 0 |
| Curiosity as a Self-Supervised Method to Improve Exploration in De novo Drug Design | Sep 24, 2023 | DiversityDrug Design | CodeCode Available | 0 |
| GGL-PPI: Geometric Graph Learning to Predict Mutation-Induced Binding Free Energy Changes | Sep 23, 2023 | Drug DesignDrug Discovery | CodeCode Available | 0 |
| HydraScreen: A Generalizable Structure-Based Deep Learning Approach to Drug Discovery | Sep 22, 2023 | Drug DesignDrug Discovery | —Unverified | 0 |
| NLRP3 monomer Functional Dynamics: from the Effects of Allosteric Binding to Implications for Drug Design | Sep 7, 2023 | Drug Design | —Unverified | 0 |
| Unveiling the frontiers of deep learning: innovations shaping diverse domains | Sep 6, 2023 | Deep LearningDrug Design | —Unverified | 0 |
| The known unknowns of the Hsp90 chaperone | Aug 31, 2023 | Drug DesignKnown Unknowns | —Unverified | 0 |
| Shape-conditioned 3D Molecule Generation via Equivariant Diffusion Models | Aug 23, 2023 | 3D Molecule GenerationDrug Design | —Unverified | 0 |
| Learning MDL logic programs from noisy data | Aug 18, 2023 | Drug DesignInductive logic programming | CodeCode Available | 0 |
| CTAGE: Curvature-Based Topology-Aware Graph Embedding for Learning Molecular Representations | Jul 25, 2023 | Drug DesignGraph Embedding | —Unverified | 0 |
| Geometric Constraints in Probabilistic Manifolds: A Bridge from Molecular Dynamics to Structured Diffusion Processes | Jul 10, 2023 | DenoisingDrug Design | —Unverified | 0 |
| ReactIE: Enhancing Chemical Reaction Extraction with Weak Supervision | Jul 4, 2023 | Drug Design | —Unverified | 0 |
| Meta-Path-based Probabilistic Soft Logic for Drug-Target Interaction Prediction | Jun 25, 2023 | Drug Design | —Unverified | 0 |
| GEO-Nav: a geometric dataset of voltage-gated sodium channels | Jun 21, 2023 | Drug DesignMorphological Analysis | CodeCode Available | 0 |
| SynerGPT: In-Context Learning for Personalized Drug Synergy Prediction and Drug Design | Jun 19, 2023 | Drug DesignIn-Context Learning | —Unverified | 0 |
| Happy People -- Image Synthesis as Black-Box Optimization Problem in the Discrete Latent Space of Deep Generative Models | Jun 11, 2023 | Drug DesignImage Generation | —Unverified | 0 |
| Phen-DC 3 Induces Refolding of Human Telomeric DNA into a Chair-Type Antiparallel G-Quadruplex through Ligand Intercalation | Jun 7, 2023 | Drug Design | —Unverified | 0 |
| Balancing Exploration and Exploitation: Disentangled β-CVAE in De Novo Drug Design | Jun 2, 2023 | DisentanglementDrug Design | —Unverified | 0 |
| Approximation-Generalization Trade-offs under (Approximate) Group Equivariance | May 27, 2023 | Drug Design | —Unverified | 0 |
| Generation of 3D Molecules in Pockets via Language Model | May 17, 2023 | 3D Molecule GenerationDrug Design | —Unverified | 0 |
| In Silico Approaches to Deliver Better Antibodies by Design: The Past, the Present and the Future | May 12, 2023 | Drug Design | —Unverified | 0 |
| Optimizing Drug Design by Merging Generative AI With Active Learning Frameworks | May 4, 2023 | Active LearningDrug Design | —Unverified | 0 |
| Knowledge graph-enhanced molecular contrastive learning with functional prompt | May 4, 2023 | Contrastive LearningDrug Design | —Unverified | 0 |
| An Equivariant Generative Framework for Molecular Graph-Structure Co-Design | Apr 12, 2023 | 3D geometryDrug Design | CodeCode Available | 0 |
| Evaluation of GPT and BERT-based models on identifying protein-protein interactions in biomedical text | Mar 30, 2023 | Drug DesignLiterature Mining | —Unverified | 0 |
| Utilizing Reinforcement Learning for de novo Drug Design | Mar 30, 2023 | DiversityDrug Design | CodeCode Available | 0 |
| Molecular Property Prediction by Semantic-invariant Contrastive Learning | Mar 13, 2023 | Contrastive LearningDrug Design | —Unverified | 0 |
| DP-Fast MH: Private, Fast, and Accurate Metropolis-Hastings for Large-Scale Bayesian Inference | Mar 10, 2023 | Bayesian InferenceDrug Design | CodeCode Available | 0 |
| Infinite Physical Monkey: Do Deep Learning Methods Really Perform Better in Conformation Generation? | Mar 8, 2023 | Drug DesignDrug Discovery | —Unverified | 0 |
| Accurate Free Energy Estimations of Molecular Systems Via Flow-based Targeted Free Energy Perturbation | Feb 23, 2023 | Drug Design | —Unverified | 0 |
| Machine learning for the prediction of safe and biologically active organophosphorus molecules | Feb 21, 2023 | Drug DesignDrug Discovery | —Unverified | 0 |
| ClaPIM: Scalable Sequence CLAssification using Processing-In-Memory | Feb 16, 2023 | ClassificationDrug Design | CodeCode Available | 0 |
| Do Deep Learning Models Really Outperform Traditional Approaches in Molecular Docking? | Feb 14, 2023 | Deep LearningDrug Design | —Unverified | 0 |
| PrefixMol: Target- and Chemistry-aware Molecule Design via Prefix Embedding | Feb 14, 2023 | Drug DesignMulti-Task Learning | —Unverified | 0 |
| Transfer Learning for Bayesian Optimization: A Survey | Feb 12, 2023 | Bayesian OptimizationDrug Design | —Unverified | 0 |
| 3D Molecular Generation via Virtual Dynamics | Feb 12, 2023 | Drug DesignDrug Discovery | —Unverified | 0 |
| Protein-protein docking using a tensor train black-box optimization method | Feb 7, 2023 | Drug Design | —Unverified | 0 |
| Persistent Dirac for molecular representation | Feb 5, 2023 | Drug Designmolecular representation | —Unverified | 0 |
| Data-Efficient Protein 3D Geometric Pretraining via Refinement of Diffused Protein Structure Decoy | Feb 5, 2023 | DiversityDrug Design | —Unverified | 0 |
| StriderNET: A Graph Reinforcement Learning Approach to Optimize Atomic Structures on Rough Energy Landscapes | Jan 29, 2023 | Drug Design | —Unverified | 0 |
| Geometric Graph Learning with Extended Atom-Types Features for Protein-Ligand Binding Affinity Prediction | Jan 15, 2023 | Drug DesignGraph Learning | CodeCode Available | 0 |