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| Roughness of molecular property landscapes and its impact on modellability | Jul 19, 2022 | Drug Designregression | CodeCode Available | 0 |
| BoKDiff: Best-of-K Diffusion Alignment for Target-Specific 3D Molecule Generation | Jan 26, 2025 | 3D Molecule GenerationDrug Design | CodeCode Available | 0 |
| Fréchet ChemNet Distance: A metric for generative models for molecules in drug discovery | Mar 26, 2018 | Drug DesignDrug Discovery | CodeCode Available | 0 |
| Assay2Mol: large language model-based drug design using BioAssay context | Jul 16, 2025 | DescriptiveDrug Design | CodeCode Available | 0 |
| Learning MDL logic programs from noisy data | Aug 18, 2023 | Drug DesignInductive logic programming | CodeCode Available | 0 |
| Equivalent Distance Geometry Error for Molecular Conformation Comparison | Nov 13, 2021 | Drug Design | CodeCode Available | 0 |
| Learning big logical rules by joining small rules | Jan 29, 2024 | Drug DesignInductive logic programming | CodeCode Available | 0 |
| CrossBind: Collaborative Cross-Modal Identification of Protein Nucleic-Acid-Binding Residues | Dec 19, 2023 | Contrastive LearningDrug Design | CodeCode Available | 0 |
| EquiBoost: An Equivariant Boosting Approach to Molecular Conformation Generation | Jan 9, 2025 | DiversityDrug Design | CodeCode Available | 0 |
| Large Language Models for Controllable Multi-property Multi-objective Molecule Optimization | May 29, 2025 | Drug Design | CodeCode Available | 0 |
| Critical review of conformational B-cell epitope prediction methods | Jan 10, 2023 | BenchmarkingDrug Design | CodeCode Available | 0 |
| Predicting solvation free energies with an implicit solvent machine learning potential | May 31, 2024 | Drug DesignGraph Neural Network | CodeCode Available | 0 |
| Insights into performance evaluation of com-pound-protein interaction prediction methods | Jan 28, 2022 | Drug Design | CodeCode Available | 0 |
| ClaPIM: Scalable Sequence CLAssification using Processing-In-Memory | Feb 16, 2023 | ClassificationDrug Design | CodeCode Available | 0 |
| Empirical Evidence for the Fragment level Understanding on Drug Molecular Structure of LLMs | Jan 15, 2024 | Drug DesignDrug Discovery | CodeCode Available | 0 |
| CASTER: Predicting Drug Interactions with Chemical Substructure Representation | Nov 15, 2019 | Dictionary LearningDrug Design | CodeCode Available | 0 |
| DrugGen enhances drug discovery with large language models and reinforcement learning | Apr 18, 2025 | Drug DesignDrug Discovery | CodeCode Available | 0 |
| Sever: A Robust Meta-Algorithm for Stochastic Optimization | Mar 7, 2018 | Drug DesignStochastic Optimization | CodeCode Available | 0 |
| Image-Conditioned Graph Generation for Road Network Extraction | Oct 31, 2019 | Drug DesignGraph Generation | CodeCode Available | 0 |
| Guided Multi-objective Generative AI to Enhance Structure-based Drug Design | May 20, 2024 | Drug DesignDrug Discovery | CodeCode Available | 0 |
| GGL-PPI: Geometric Graph Learning to Predict Mutation-Induced Binding Free Energy Changes | Sep 23, 2023 | Drug DesignDrug Discovery | CodeCode Available | 0 |
| Protein-Ligand Scoring with Convolutional Neural Networks | Dec 8, 2016 | Drug DesignDrug Discovery | CodeCode Available | 0 |
| An Equivariant Generative Framework for Molecular Graph-Structure Co-Design | Apr 12, 2023 | 3D geometryDrug Design | CodeCode Available | 0 |
| An Efficient MCMC Approach to Energy Function Optimization in Protein Structure Prediction | Nov 6, 2022 | CPUDrug Design | CodeCode Available | 0 |