| Spherical Channels for Modeling Atomic Interactions | Jun 29, 2022 | 10-shot image generationComputational chemistry | CodeCode Available | 4 | 5 |
| Modeling Molecular Structures with Intrinsic Diffusion Models | Feb 23, 2023 | Computational chemistryMolecular Docking | CodeCode Available | 3 | 5 |
| MACE: Higher Order Equivariant Message Passing Neural Networks for Fast and Accurate Force Fields | Jun 15, 2022 | Computational chemistry | CodeCode Available | 3 | 5 |
| The dark side of the forces: assessing non-conservative force models for atomistic machine learning | Dec 16, 2024 | Computational chemistryComputational Efficiency | CodeCode Available | 2 | 5 |
| ChemCrow: Augmenting large-language models with chemistry tools | Apr 11, 2023 | Computational chemistryDrug Discovery | CodeCode Available | 2 | 5 |
| Torsional Diffusion for Molecular Conformer Generation | Jun 1, 2022 | BIG-bench Machine LearningComputational chemistry | CodeCode Available | 2 | 5 |
| ChemReasoner: Heuristic Search over a Large Language Model's Knowledge Space using Quantum-Chemical Feedback | Feb 15, 2024 | Computational chemistryGraph Neural Network | CodeCode Available | 2 | 5 |
| Chemformer: a pre-trained transformer for computational chemistry | Jan 31, 2022 | Computational chemistryRetrosynthesis | CodeCode Available | 2 | 5 |
| DeepMol: An Automated Machine and Deep Learning Framework for Computational Chemistr | Jun 1, 2024 | Activity PredictionAutoML | CodeCode Available | 2 | 5 |
| Towards Fast, Specialized Machine Learning Force Fields: Distilling Foundation Models via Energy Hessians | Jan 15, 2025 | Computational chemistryKnowledge Distillation | CodeCode Available | 1 | 5 |
| Symmetry-Informed Geometric Representation for Molecules, Proteins, and Crystalline Materials | Jun 15, 2023 | BenchmarkingComputational chemistry | CodeCode Available | 1 | 5 |
| TorsionNet: A Reinforcement Learning Approach to Sequential Conformer Search | Jun 12, 2020 | Computational chemistryreinforcement-learning | CodeCode Available | 1 | 5 |
| Learning Gradient Fields for Molecular Conformation Generation | May 9, 2021 | Computational chemistryTranslation | CodeCode Available | 1 | 5 |
| Can Graph Neural Networks Count Substructures? | Feb 10, 2020 | Computational chemistryIsomorphism Testing | CodeCode Available | 1 | 5 |
| MLatom 3: Platform for machine learning-enhanced computational chemistry simulations and workflows | Oct 31, 2023 | Cloud ComputingComputational chemistry | CodeCode Available | 1 | 5 |
| Monte Carlo Thought Search: Large Language Model Querying for Complex Scientific Reasoning in Catalyst Design | Oct 22, 2023 | Computational chemistryInstruction Following | CodeCode Available | 1 | 5 |
| Model free variable importance for high dimensional data | Nov 15, 2022 | Computational chemistrymodel | CodeCode Available | 1 | 5 |
| Molecular relaxation by reverse diffusion with time step prediction | Apr 16, 2024 | Computational chemistryDenoising | CodeCode Available | 1 | 5 |
| Improving Molecular Contrastive Learning via Faulty Negative Mitigation and Decomposed Fragment Contrast | Feb 18, 2022 | Computational chemistryContrastive Learning | CodeCode Available | 1 | 5 |
| Embrace rejection: Kernel matrix approximation by accelerated randomly pivoted Cholesky | Oct 4, 2024 | Computational chemistry | CodeCode Available | 1 | 5 |
| Semi-Supervised Junction Tree Variational Autoencoder for Molecular Property Prediction | Aug 10, 2022 | Computational chemistryDrug Discovery | CodeCode Available | 1 | 5 |
| Efficient and Scalable Density Functional Theory Hamiltonian Prediction through Adaptive Sparsity | Feb 3, 2025 | Computational chemistryPrediction | CodeCode Available | 1 | 5 |
| Efficient Conformal Prediction via Cascaded Inference with Expanded Admission | Jul 6, 2020 | Computational chemistryConformal Prediction | CodeCode Available | 1 | 5 |
| End-to-End Differentiable Molecular Mechanics Force Field Construction | Oct 2, 2020 | Computational chemistryDrug Discovery | CodeCode Available | 1 | 5 |
| Unlocking Chemical Insights: Superior Molecular Representations from Intermediate Encoder Layers | Jun 6, 2025 | Computational chemistryComputational Efficiency | CodeCode Available | 0 | 5 |
| Transfer learning for chemically accurate interatomic neural network potentials | Dec 7, 2022 | Atomic ForcesComputational chemistry | CodeCode Available | 0 | 5 |
| Conformal Prediction Sets with Limited False Positives | Feb 15, 2022 | Computational chemistryConformal Prediction | CodeCode Available | 0 | 5 |
| T-Rex: Text-assisted Retrosynthesis Prediction | Jan 26, 2024 | Computational chemistryPrediction | CodeCode Available | 0 | 5 |
| Uncertainty Estimation for Molecules: Desiderata and Methods | Jun 20, 2023 | Computational chemistry | CodeCode Available | 0 | 5 |
| Beyond MD17: the reactive xxMD dataset | Aug 22, 2023 | BenchmarkingComputational chemistry | CodeCode Available | 0 | 5 |
| GEM-2: Next Generation Molecular Property Prediction Network by Modeling Full-range Many-body Interactions | Aug 11, 2022 | Computational chemistryDrug Discovery | CodeCode Available | 0 | 5 |
| Flexible dual-branched message passing neural network for quantum mechanical property prediction with molecular conformation | Jun 14, 2021 | Computational chemistryMolecular Property Prediction | CodeCode Available | 0 | 5 |
| Few-shot Conformal Prediction with Auxiliary Tasks | Feb 17, 2021 | Computational chemistryConformal Prediction | CodeCode Available | 0 | 5 |
| Chemception: A Deep Neural Network with Minimal Chemistry Knowledge Matches the Performance of Expert-developed QSAR/QSPR Models | Jun 20, 2017 | Computational chemistryDeep Learning | CodeCode Available | 0 | 5 |
| Predicting Organic Reaction Outcomes with Weisfeiler-Lehman Network | Sep 13, 2017 | Computational chemistry | CodeCode Available | 0 | 5 |
| Molecule Property Prediction and Classification with Graph Hypernetworks | Feb 1, 2020 | ClassificationComputational chemistry | CodeCode Available | 0 | 5 |
| MolOpt: Autonomous Molecular Geometry Optimization using Multi-Agent Reinforcement Learning | Aug 24, 2023 | 3D geometryComputational chemistry | CodeCode Available | 0 | 5 |
| SE3Set: Harnessing equivariant hypergraph neural networks for molecular representation learning | May 26, 2024 | Computational chemistrymolecular representation | CodeCode Available | 0 | 5 |
| Mitigating Exposure Bias in Score-Based Generation of Molecular Conformations | Sep 21, 2024 | Computational chemistry | CodeCode Available | 0 | 5 |
| An Exploration of Conditioning Methods in Graph Neural Networks | May 3, 2023 | AttributeComputational chemistry | CodeCode Available | 0 | 5 |
| Improving Molecular Pretraining with Complementary Featurizations | Sep 29, 2022 | Computational chemistryDrug Discovery | CodeCode Available | 0 | 5 |
| Instruction-Based Molecular Graph Generation with Unified Text-Graph Diffusion Model | Aug 19, 2024 | Computational chemistryDenoising | CodeCode Available | 0 | 5 |
| Deep Spatial Learning with Molecular Vibration | Nov 14, 2020 | BIG-bench Machine LearningComputational chemistry | CodeCode Available | 0 | 5 |
| Physics-Informed Weakly Supervised Learning for Interatomic Potentials | Jul 23, 2024 | Computational chemistryWeakly-supervised Learning | CodeCode Available | 0 | 5 |
| Generalizing Neural Wave Functions | Feb 8, 2023 | Computational chemistry | CodeCode Available | 0 | 5 |
| First-principles molecular structure search with a genetic algorithm | Oct 13, 2015 | Computational chemistry | CodeCode Available | 0 | 5 |
| Gold-standard solutions to the Schrödinger equation using deep learning: How much physics do we need? | May 19, 2022 | Computational chemistry | CodeCode Available | 0 | 5 |
| Integrating convolutional layers and biformer network with forward-forward and backpropagation training | Feb 28, 2025 | Computational chemistryDrug Discovery | CodeCode Available | 0 | 5 |
| Deep Learning for Computational Chemistry | Jan 17, 2017 | BIG-bench Machine LearningComputational chemistry | —Unverified | 0 | 0 |
| A Transformer Model for Predicting Chemical Reaction Products from Generic Templates | Mar 4, 2025 | Computational chemistryEfficient Exploration | —Unverified | 0 | 0 |