| xLSTM-UNet can be an Effective 2D & 3D Medical Image Segmentation Backbone with Vision-LSTM (ViL) better than its Mamba Counterpart | Jul 1, 2024 | 3D Medical Imaging Segmentationimage-classification | CodeCode Available | 3 | 5 |
| UNETR: Transformers for 3D Medical Image Segmentation | Mar 18, 2021 | 3D Medical Imaging SegmentationDecoder | CodeCode Available | 3 | 5 |
| nnMamba: 3D Biomedical Image Segmentation, Classification and Landmark Detection with State Space Model | Feb 5, 2024 | 3D Medical Imaging SegmentationImage Segmentation | CodeCode Available | 2 | 5 |
| MIST: A Simple and Scalable End-To-End 3D Medical Imaging Segmentation Framework | Jul 31, 2024 | 3D Medical Imaging SegmentationMedical Image Segmentation | CodeCode Available | 2 | 5 |
| SegReg: Segmenting OARs by Registering MR Images and CT Annotations | Nov 12, 2023 | 3D Medical Imaging SegmentationSegmentation | CodeCode Available | 1 | 5 |
| An Embarrassingly Simple Consistency Regularization Method for Semi-Supervised Medical Image Segmentation | Feb 1, 2022 | 3D Medical Imaging SegmentationImage Segmentation | CodeCode Available | 1 | 5 |
| BreastScreening: On the Use of Multi-Modality in Medical Imaging Diagnosis | Apr 7, 2020 | 3D Medical Imaging SegmentationAutomatic Machine Learning Model Selection | CodeCode Available | 1 | 5 |
| CAKES: Channel-wise Automatic KErnel Shrinking for Efficient 3D Networks | Mar 28, 2020 | 3D Medical Imaging SegmentationAction Recognition | CodeCode Available | 1 | 5 |
| Direct cortical thickness estimation using deep learning‐based anatomy segmentation and cortex parcellation | Nov 5, 2020 | 3D Medical Imaging SegmentationAnatomy | CodeCode Available | 1 | 5 |
| FastSAM3D: An Efficient Segment Anything Model for 3D Volumetric Medical Images | Mar 14, 2024 | 3D Medical Imaging SegmentationGPU | CodeCode Available | 1 | 5 |
| KiU-Net: Overcomplete Convolutional Architectures for Biomedical Image and Volumetric Segmentation | Oct 4, 2020 | 3D Medical Imaging SegmentationBrain Tumor Segmentation | CodeCode Available | 1 | 5 |
| LoRKD: Low-Rank Knowledge Decomposition for Medical Foundation Models | Sep 29, 2024 | 3D Medical Imaging SegmentationMedical Image Classification | CodeCode Available | 1 | 5 |
| Med3D: Transfer Learning for 3D Medical Image Analysis | Apr 1, 2019 | 3D Medical Imaging SegmentationLiver Segmentation | CodeCode Available | 1 | 5 |
| Reliable brain morphometry from contrast‐enhanced T1w‐MRI in patients with multiple sclerosis | Oct 17, 2022 | 3D Medical Imaging SegmentationAnatomy | CodeCode Available | 1 | 5 |
| Automated Segmentation and Connectivity Analysis for Normal Pressure Hydrocephalus | Jan 10, 2022 | 3D Medical Imaging SegmentationMedical Image Segmentation | CodeCode Available | 0 | 5 |
| A Longitudinal Method for Simultaneous Whole-Brain and Lesion Segmentation in Multiple Sclerosis | Aug 12, 2020 | 3D Medical Imaging SegmentationBrain Image Segmentation | CodeCode Available | 0 | 5 |
| An application of cascaded 3D fully convolutional networks for medical image segmentation | Mar 14, 2018 | 3D Medical Imaging SegmentationImage Segmentation | CodeCode Available | 0 | 5 |
| AnatomyNet: Deep Learning for Fast and Fully Automated Whole-volume Segmentation of Head and Neck Anatomy | Aug 15, 2018 | 3D Medical Imaging SegmentationAnatomy | CodeCode Available | 0 | 5 |
| On the Compactness, Efficiency, and Representation of 3D Convolutional Networks: Brain Parcellation as a Pretext Task | Jul 6, 2017 | 3D Medical Imaging SegmentationImage Segmentation | CodeCode Available | 0 | 5 |
| A New Ensemble Learning Framework for 3D Biomedical Image Segmentation | Dec 10, 2018 | 3D Medical Imaging SegmentationEnsemble Learning | CodeCode Available | 0 | 5 |
| An Open-Source Tool for Longitudinal Whole-Brain and White Matter Lesion Segmentation | Jul 10, 2022 | 3D Medical Imaging SegmentationBrain Image Segmentation | CodeCode Available | 0 | 5 |
| Association of genomic subtypes of lower-grade gliomas with shape features automatically extracted by a deep learning algorithm | Jun 9, 2019 | 3D Medical Imaging SegmentationBrain Segmentation | CodeCode Available | 0 | 5 |
| Combining Fully Convolutional and Recurrent Neural Networks for 3D Biomedical Image Segmentation | Sep 5, 2016 | 3D Medical Imaging SegmentationImage Segmentation | CodeCode Available | 0 | 5 |
| Conditional Random Fields as Recurrent Neural Networks for 3D Medical Imaging Segmentation | Jul 19, 2018 | 3D Medical Imaging SegmentationMedical Image Segmentation | CodeCode Available | 0 | 5 |
| Dynamic Linear Transformer for 3D Biomedical Image Segmentation | Jun 1, 2022 | 3D Medical Imaging SegmentationDecoder | CodeCode Available | 0 | 5 |
| Efficient Multi-Scale 3D CNN with Fully Connected CRF for Accurate Brain Lesion Segmentation | Mar 18, 2016 | 3D Medical Imaging SegmentationBrain Lesion Segmentation From Mri | CodeCode Available | 0 | 5 |
| Elastic Boundary Projection for 3D Medical Image Segmentation | Dec 3, 2018 | 3D Medical Imaging SegmentationImage Segmentation | CodeCode Available | 0 | 5 |
| Enforcing temporal consistency in Deep Learning segmentation of brain MR images | Jun 13, 2019 | 3D Medical Imaging Segmentation4D Spatio Temporal Semantic Segmentation | CodeCode Available | 0 | 5 |
| Semantic Context Forests for Learning-Based Knee Cartilage Segmentation in 3D MR Images | Jul 11, 2013 | 3D Medical Imaging SegmentationSegmentation | CodeCode Available | 0 | 5 |
| Few-shot 3D Multi-modal Medical Image Segmentation using Generative Adversarial Learning | Oct 29, 2018 | 3D Medical Imaging SegmentationBrain Image Segmentation | CodeCode Available | 0 | 5 |
| Linking convolutional neural networks with graph convolutional networks: application in pulmonary artery-vein separation | Sep 1, 2019 | 3D Medical Imaging SegmentationMedical Image Segmentation | CodeCode Available | 0 | 5 |
| TernaryNet: Faster Deep Model Inference without GPUs for Medical 3D Segmentation using Sparse and Binary Convolutions | Jan 29, 2018 | 3D Medical Imaging SegmentationDiagnostic | CodeCode Available | 0 | 5 |
| 3D fully convolutional networks for subcortical segmentation in MRI: A large-scale study | Dec 12, 2016 | 3D Medical Imaging SegmentationBrain Segmentation | CodeCode Available | 0 | 5 |
| A Contrast-Adaptive Method for Simultaneous Whole-Brain and Lesion Segmentation in Multiple Sclerosis | May 11, 2020 | 3D Medical Imaging SegmentationBrain Image Segmentation | CodeCode Available | 0 | 5 |
| Pulmonary Artery–Vein Classification in CT Images Using Deep Learning | May 4, 2018 | 3D Medical Imaging SegmentationComputed Tomography (CT) | —Unverified | 0 | 0 |
| 3D Densely Convolutional Networks for VolumetricSegmentation | Sep 13, 2017 | 3D Medical Imaging SegmentationBrain Segmentation | —Unverified | 0 | 0 |
| Cats: Complementary CNN and Transformer Encoders for Segmentation | Aug 24, 2022 | 3D Medical Imaging SegmentationDecoder | —Unverified | 0 | 0 |
| A joint 3D UNet-Graph Neural Network-based method for Airway Segmentation from chest CTs | Aug 22, 2019 | 3D Medical Imaging SegmentationGraph Neural Network | —Unverified | 0 | 0 |
| A Novel Convolutional-Free Method for 3D Medical Imaging Segmentation | Feb 8, 2025 | 3D Medical Imaging SegmentationDomain Adaptation | —Unverified | 0 | 0 |
| 3D Medical Imaging Segmentation on Non-Contrast CT | Mar 11, 2025 | 3D Medical Imaging SegmentationImage Segmentation | —Unverified | 0 | 0 |
| Spatial Aggregation of Holistically-Nested Convolutional Neural Networks for Automated Pancreas Localization and Segmentation | Jan 31, 2017 | 3D Medical Imaging SegmentationComputed Tomography (CT) | —Unverified | 0 | 0 |
