REINFORCE-ING Chemical Language Models in Drug Design

Abstract

Chemical language models, combined with reinforcement learning, have shown significant promise to efficiently traverse large chemical spaces in drug design. However, the performance of various RL algorithms and their best practices for practical drug design are still unclear. Here, starting from the principles of the REINFORCE algorithm, we investigate the effect of different components from RL theory including experience replay, hill-climbing, baselines to reduce variance, and alternative reward shaping. Additionally we demonstrate how RL hyperparameters can be fine-tuned for effectiveness, efficiency, or chemical regularization as demonstrated using the MolOpt benchmark.

Tasks

Reproductions