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A Cascaded Residual UNET for Fully Automated Segmentation of Prostate and Peripheral Zone in T2-weighted 3D Fast Spin Echo Images

2020-12-25Unverified0· sign in to hype

Lavanya Umapathy, Wyatt Unger, Faryal Shareef, Hina Arif, Diego Martin, Maria Altbach, Ali Bilgin

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Abstract

Multi-parametric MR images have been shown to be effective in the non-invasive diagnosis of prostate cancer. Automated segmentation of the prostate eliminates the need for manual annotation by a radiologist which is time consuming. This improves efficiency in the extraction of imaging features for the characterization of prostate tissues. In this work, we propose a fully automated cascaded deep learning architecture with residual blocks, Cascaded MRes-UNET, for segmentation of the prostate gland and the peripheral zone in one pass through the network. The network yields high Dice scores (0.91.02), precision (0.91.04), and recall scores (0.92.03) in prostate segmentation compared to manual annotations by an experienced radiologist. The average difference in total prostate volume estimation is less than 5%.

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